RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 HACD2Q6Y1H2 254 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC16A12Q6ZSM3 486 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 H1FNTQ75WM6 255 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 DPPA2Q7Z7J5 298 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ADGRE4PQ86SQ3 457 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 Q8N1Y9 231 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CLIP4Q8N3C7 705 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 RPRMLQ8N4K4 120 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 FITM2Q8N6M3 262 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CD300LFQ8TDQ1 290 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 UBASH3BQ8TF42 649 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SSC4DQ8WTU2 575 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PHF10Q8WUB8 498 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 DPF1Q92782 380 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 YIPF5Q969M3 257 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 RAB24Q969Q5 203 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CCDC120Q96HB5 630 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 MRGPRX4Q96LA9 322 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 NEU1Q99519 415 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 MDFIQ99750 246 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TTYH2Q9BSA4 534 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 BDH2Q9BUT1 245 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 POTEKPQ9BYX7 375 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 GSX1Q9H4S2 264 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ARMC7Q9H6L4 198 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CALHM2Q9HA72 323 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CENPMQ9NSP4 180 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 STOML1Q9UBI4 398 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 DAPK2Q9UIK4 370 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 COA3Q9Y2R0 106 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 FAM215AQ9Y5M1 114 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PUS1Q9Y606 427 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 AP4B1Q9Y6B7 739 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF407Q9C0G0 2248 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 FREM3P0C091 2139 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CD8B2A6NJW9 211 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 PRR23D1E9PI22 279 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 FAAHO00519 579 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 TPST1O60507 370 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZG16O60844 167 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 MITFO75030 526 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RHBDL1O75783 438 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 TOXO94900 526 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 MFN2O95140 757 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 AKR7A3O95154 331 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 PRR23D2P0DMB1 279 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 GLI4P10075 376 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 NQO1P15559 274 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 AGAP20933 346 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 TIMP3P35625 211 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CAPGP40121 348 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC1A3P43003 542 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 GPR4P46093 362 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC6A8P48029 635 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 IDH2P48735 452 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CCR4P51679 360 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CLDN20P56880 219 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 NUP107P57740 925 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 EEFSECP57772 596 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SRYQ05066 204 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC3A1Q07837 685 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 VEZF1Q14119 521 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 PON3Q15166 354 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SEC23BQ15437 767 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 FAM189A2Q15884 450 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CYP51A1Q16850 503 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 LRRC36Q1X8D7 754 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 VMACQ2NL98 169 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 PLA1AQ53H76 456 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 PDSS1Q5T2R2 415 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RIPPLY2Q5TAB7 128 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 NSUN5P2Q63ZY6 315 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 XKRXQ6PP77 449 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RPTNQ6XPR3 784 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF836Q6ZNA1 936 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SEM1Q6ZVN7 128 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF550Q7Z398 422 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 MRGPRGQ86SM5 289 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 LHFPL3Q86UP9 236 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC30A8Q8IWU4 369 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF440Q8IYI8 595 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 MICU2Q8IYU8 434 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF786Q8N393 782 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 MARVELD2Q8N4S9 558 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 CCDC197Q8NCU1 140 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RNASE11Q8TAA1 199 aaKnown RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 GRPEL2Q8TAA5 225 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 DNAJC9Q8WXX5 260 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 TMEM234Q8WY98 164 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ST8SIA1Q92185 356 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RND1Q92730 232 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 FOXRED1Q96CU9 486 aaPredicted RBP5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 LURAP1Q96LR2 239 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RNF145Q96MT1 663 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF607Q96SK3 696 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 SPATA5L1Q9BVQ7 753 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 ACER3Q9NUN7 267 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 LPAR3Q9UBY5 353 aa5.61□□□□□ -1.51
ATPAF1-209ENST00000529214 RPH3ALQ9UNE2 315 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms