RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ZBTB8AQ96BR9 441 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 DERL3Q96Q80 235 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 DDA1Q9BW61 102 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 PROK2Q9HC23 129 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 B3GAT1Q9P2W7 334 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 EXTL2Q9UBQ6 330 aa23.19■■□□□ 1.3
COL13A1-214ENST00000522165 A0A1B0GTH9 108 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 CENPBD1B2RD01 187 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 PAHP00439 452 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 OPN1LWP04000 364 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 EIF4EP06730 217 aaKnown RBP23.18■■□□□ 1.3
COL13A1-214ENST00000522165 SPARCP09486 303 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 SRMP19623 302 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 ADAM8P78325 824 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 NHLRC1Q6VVB1 395 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-214ENST00000522165 ADPRHL1Q8NDY3 354 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 OR4C45A6NMZ5 311 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 RAB40ALP0C0E4 278 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 JMJD7P0C870 316 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 ATF1P18846 271 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 OTX2P32243 289 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 PTGS2P35354 604 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 MAGEB1P43366 347 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 SELENBP1Q13228 472 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 MEP1BQ16820 701 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 TMEM156Q8N614 296 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 SLC25A43Q8WUT9 341 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-214ENST00000522165 SPRY4Q9C004 299 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 ELOVL3Q9HB03 270 aa23.18■■□□□ 1.3
COL13A1-214ENST00000522165 RPH3AQ9Y2J0 694 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-214ENST00000522165 AK6Q9Y3D8 172 aaKnown RBP23.18■■□□□ 1.3
COL13A1-214ENST00000522165 A0A087WZY1 265 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 LINC00854A0A1B0GVQ3 168 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 HLA-DQB1P01920 261 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 NPR2P20594 1047 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 FMODQ06828 376 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 SLC17A1Q14916 467 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 DNM1P34Q6PK57 102 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 ORAI1Q96D31 301 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 LIN37Q96GY3 246 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-214ENST00000522165 OR5B2Q96R09 309 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 A0A1W2PNR3 127 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 P2RY4P51582 365 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 Q499Y3 187 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 SLC22A10Q63ZE4 541 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 FDX2Q6P4F2 183 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 LRRN1Q6UXK5 716 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 ZNF679Q8IYX0 411 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 HPF1Q9NWY4 346 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 ABRACLQ9P1F3 81 aa23.17■■□□□ 1.3
COL13A1-214ENST00000522165 TRBV5-5A0A0J9YX44 114 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 MPZL1O95297 269 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 FKBP2P26885 142 aaKnown RBP23.16■■□□□ 1.3
COL13A1-214ENST00000522165 OR2B6P58173 313 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 ROM1Q03395 351 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 SSPNQ14714 243 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 CDCP2Q5VXM1 449 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 SPATC1Q76KD6 591 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 PRSS35Q8N3Z0 413 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 SLC26A10Q8NG04 563 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 OR4M1Q8NGD0 313 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 DCBLD2Q96PD2 775 aa23.16■■□□□ 1.3
COL13A1-214ENST00000522165 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.16■■□□□ 1.3
COL13A1-214ENST00000522165 FARSAQ9Y285 508 aaKnown RBP23.16■■□□□ 1.3
COL13A1-214ENST00000522165 TMEM212A6NML5 194 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 TALDO1P37837 337 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 BIDP55957 195 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 GTPBP8Q8N3Z3 284 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-214ENST00000522165 CELF2-AS1Q8N7Q2 184 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 ZNF454Q8N9F8 522 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 C4orf45Q96LM5 186 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 NEDD4LQ96PU5 975 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 C9orf172C9J069 976 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 SNPHO15079 494 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 ICAM2P13598 275 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 RBMS1P29558 406 aaKnown RBP23.15■■□□□ 1.3
COL13A1-214ENST00000522165 RASGEF1BQ0VAM2 473 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 Q0VFX4 171 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 TMEM176BQ3YBM2 270 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-214ENST00000522165 TRIQKQ629K1 86 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 OR5H6Q8NGV6 325 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 GFI1Q99684 422 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 COMMD4Q9H0A8 199 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 C11orf54Q9H0W9 315 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-214ENST00000522165 KLHL13Q9P2N7 655 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 HDGFL3Q9Y3E1 203 aa23.15■■□□□ 1.3
COL13A1-214ENST00000522165 FREM3P0C091 2139 aa23.14■■□□□ 1.3
COL13A1-214ENST00000522165 IGKV1D-43A0A0B4J1Z2 117 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 A0A0G2JMP0 313 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 A0A0X1KG70 313 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 ANKRD61A6NGH8 418 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 PDCD5O14737 125 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 PLA2G10O15496 165 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 ZNF432O94892 652 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 LIFP15018 202 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 MAPK3P27361 379 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-214ENST00000522165 DPP4P27487 766 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 SFTPDP35247 375 aa23.14■■□□□ 1.29
COL13A1-214ENST00000522165 KIR3DL2P43630 455 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms