RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	ELMOD3	Q96FG2	381 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	CCT8L2	Q96SF2	557 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	FOXB1	Q99853	325 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	EMC6	Q9BV81	110 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	MS4A7	Q9GZW8	240 aa	Predicted RBP	9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	SLITRK2	Q9H156	845 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	DENND2D	Q9H6A0	471 aa	Predicted RBP	9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	ASIC5	Q9NY37	505 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	CALML5	Q9NZT1	146 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	B3GAT1	Q9P2W7	334 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	P2RX2	Q9UBL9	471 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	OPN4	Q9UHM6	478 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	NUP50	Q9UKX7	468 aa		9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	ZNF443	Q9Y2A4	671 aa	Predicted RBP	9.2	□□□□□ -0.94
SKAP2-209	ENST00000497511	TMEM247	A6NEH6	219 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	FTCDNL1	E5RQL4	147 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511		E9PBE3	544 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	NPIPB7	O75200	414 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	FOXH1	O75593	365 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	SERPINI2	O75830	405 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	KRT75	O95678	551 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	C1QC	P02747	245 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	SHBG	P04278	402 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	GRPR	P30550	384 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	CRISP3	P54108	245 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	SMU1	Q2TAY7	513 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	FAM69A	Q5T7M9	428 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	C20orf196	Q8IYI0	205 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	DVL3	Q92997	716 aa	Predicted RBP	9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	POP5	Q969H6	163 aa	Known RBP	9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	SLC38A4	Q969I6	547 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	TESC	Q96BS2	214 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	LRRC58	Q96CX6	371 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	APOPT1	Q96IL0	206 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	C16orf45	Q96MC5	204 aa	Predicted RBP	9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	PKP2	Q99959	881 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	MRI1	Q9BV20	369 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	PTDSS2	Q9BVG9	487 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	RNF121	Q9H920	327 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	PPCS	Q9HAB8	311 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	ZNF69	Q9UC07	566 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	AUP1	Q9Y679	476 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	CACNG2	Q9Y698	323 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	DSPP	Q9NZW4	1301 aa		9.19	□□□□□ -0.94
SKAP2-209	ENST00000497511	KRTAP4-8	A0A0G2JLE6	195 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TCRBV5S2	A0A599	114 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TLDC2	A0PJX2	215 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TRAF3IP2	O43734	574 aa	Predicted RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	ENTPD5	O75356	428 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	KNG1	P01042	644 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	FSHB	P01225	129 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SERPINA5	P05154	406 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	BCHE	P06276	602 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	PATE4	P0C8F1	98 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	MDK	P21741	143 aa	Predicted RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	OMG	P23515	440 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	GCH1	P30793	250 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	CRAT	P43155	626 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	NME5	P56597	212 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	HOXC5	Q00444	222 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SLC3A1	Q07837	685 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	RNF220	Q5VTB9	566 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	NET1	Q7Z628	596 aa	Predicted RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SERPINA11	Q86U17	422 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	BCL6B	Q8N143	479 aa	Predicted RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	CLIP4	Q8N3C7	705 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	C10orf53	Q8N6V4	93 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	CPEB3	Q8NE35	698 aa	Known RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SLC30A7	Q8NEW0	376 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TAF15	Q92804	592 aa	Known RBP eCLIP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TAAR8	Q969N4	342 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	LRR1	Q96L50	414 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	CCDC115	Q96NT0	180 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TSPAN32	Q96QS1	320 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	LRMDA	Q9H2I8	198 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	NKIRAS2	Q9NYR9	191 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	PLEK2	Q9NYT0	353 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SELENON	Q9NZV5	590 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	SLC17A7	Q9P2U7	560 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TES	Q9UGI8	421 aa	Known RBP	9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	BTNL2	Q9UIR0	455 aa		9.18	□□□□□ -0.94
SKAP2-209	ENST00000497511	TRAV36DV7	A0A075B6V5	113 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	PLSCR5	A0PG75	271 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511		M0QZ24	198 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	SPRY3	O43610	288 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	SPAG7	O75391	227 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	FARS2	O95363	451 aa	Known RBP	9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	ANP32D	O95626	131 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	GPANK1	O95872	356 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	OR8G3P	P0DMU2	310 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	CCL2	P13500	99 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	AHCY	P23526	432 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	ARRB2	P32121	409 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	MTNR1A	P48039	350 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	CSNK1A1	P48729	337 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	ZNF81	P51508	661 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	EGR4	Q05215	589 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	PMS2P3	Q13401	168 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	TBC1D28	Q2M2D7	210 aa		9.17	□□□□□ -0.94
SKAP2-209	ENST00000497511	TMEM53	Q6P2H8	277 aa		9.17	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms