RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 UNQ6126/PRO20091Q6UXV3 157 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 DCXRQ7Z4W1 244 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 KLHL15Q96M94 604 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 ZNF436Q9C0F3 470 aaPredicted RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 ANKRD19PQ9H560 264 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 GLTPQ9NZD2 209 aa12.2□□□□□ -0.46
GPC1-209ENST00000495100 MRM2Q9UI43 246 aaKnown RBP12.2□□□□□ -0.46
GPC1-209ENST00000495100 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 GLCEO94923 617 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CYB5AP00167 134 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 AK1P00568 194 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 DRD1P21728 446 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CCNOP22674 350 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 P2RX1P51575 399 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 P2RX3P56373 397 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 GMFBP60983 142 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 BAMBIQ13145 260 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 RAB11BQ15907 218 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SLC22A6Q4U2R8 563 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 NKAPLQ5M9Q1 402 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 PRAMEF8Q5VWM4 474 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 PRAMEF7Q5VXH5 474 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 KLHL24Q6TFL4 600 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 DPY19L2P2Q6ZN68 376 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 IDO2Q6ZQW0 420 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SLC35F3Q8IY50 421 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 LRRC18Q8N456 261 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 OR10K1Q8NGX5 313 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 OR2G2Q8NGZ5 317 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 VSTM2LQ96N03 204 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 STACQ99469 402 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 TINAGL1Q9GZM7 467 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 IFT46Q9NQC8 304 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 AKAP7Q9P0M2 348 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 KLHL13Q9P2N7 655 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SUSD2Q9UGT4 822 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 A0A087WUJ7 227 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SEC14L5O43304 696 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 MPIG6BO95866 241 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CTLA4P16410 223 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 FAUP35544 74 aaKnown RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 CXADRP78310 365 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 PLAURQ03405 335 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 ZNF117Q03924 483 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 POU4F2Q12837 409 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 TPRA1Q86W33 373 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 FGGYQ96C11 551 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 OR5B2Q96R09 309 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 NPAS1Q99742 590 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 PLCL2Q9UPR0 1127 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 RALGAPA1Q6GYQ0 2036 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 KIAA1671Q9BY89 1806 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 FOLR1P15328 257 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 HSD11B1P28845 292 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 RIDAP52758 137 aaKnown RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 GSG1Q2KHT4 349 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 LGALSLQ3ZCW2 172 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 WDR38Q5JTN6 314 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 UBE2NLQ5JXB2 153 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 WDR45BQ5MNZ6 344 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 EEF1A1P5Q5VTE0 462 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 LAMTOR1Q6IAA8 161 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 GVQW1Q8N7I0 195 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 OR4C16Q8NGL9 310 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
GPC1-209ENST00000495100 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CLEC1BQ9P126 229 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 CAMK2AQ9UQM7 478 aa12.19□□□□□ -0.46
GPC1-209ENST00000495100 MUC3AQ02505 3323 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 IGHV3-15A0A0B4J1V0 119 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 TSFMP43897 325 aaKnown RBP12.18□□□□□ -0.46
GPC1-209ENST00000495100 C2orf76Q3KRA6 126 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 SLC36A2Q495M3 483 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 C9orf135Q5VTT2 229 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 KIAA0895LQ68EN5 471 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 C9orf62Q8N4C0 152 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ADAMTS14Q8WXS8 1223 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 FAM3DQ96BQ1 224 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ZNF524Q96C55 264 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 TSPAN32Q96QS1 320 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 SELENOIQ9C0D9 397 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 CHMP1AQ9HD42 196 aaPredicted RBP12.18□□□□□ -0.46
GPC1-209ENST00000495100 ST6GALNAC2Q9UJ37 374 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 PCDH15Q96QU1 1955 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 PTP4A3O75365 173 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 KNG1P01042 644 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ITGA5P08648 1049 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ACHEP22303 614 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms