RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 FRAT1Q92837 279 aaPredicted RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 FGF11Q92914 225 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 VSIG2Q96IQ7 327 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 IMMP1LQ96LU5 166 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 LINC00167Q96N53 147 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 CSPG4P5Q96PW8 444 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF184Q99676 751 aaPredicted RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 NICN1Q9BSH3 213 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 RIOK2Q9BVS4 552 aaKnown RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ZYG11BQ9C0D3 744 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ACTR3CQ9C0K3 210 aaPredicted RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ACTR6Q9GZN1 396 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 OR51J1Q9H342 316 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 Q9H3A6 140 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 GAL3ST2Q9H3Q3 398 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 PTGES2Q9H7Z7 377 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ZDHHC11Q9H8X9 412 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 ADAP2Q9NPF8 381 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 HRASLS2Q9NWW9 162 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 KCNIP1Q9NZI2 227 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 CCDC59Q9P031 241 aaKnown RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 MYEF2Q9P2K5 600 aaKnown RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 LGALS13Q9UHV8 139 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 GNPTGQ9UJJ9 305 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 MMP17Q9ULZ9 603 aa1.7□□□□□ -2.14
LMNB1-207ENST00000494185 BZW2Q9Y6E2 419 aaKnown RBP1.7□□□□□ -2.14
LMNB1-207ENST00000494185 COL22A1Q8NFW1 1626 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 NEURL4Q96JN8 1562 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 A0A0B4J2A0 478 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 GLYATL1P3A0A0U1RQE8 302 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 LINC00854A0A1B0GVQ3 168 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 A0A1W2PNU3 283 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 TMEM120BA0PK00 339 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 USP27XA6NNY8 438 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 LYRM9A8MSI8 78 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 TEX46H3BTG2 121 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 K7ERQ8 282 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 PSMD11O00231 422 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZBTB5O15062 677 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 NVLO15381 856 aaKnown RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 MAGEB4O15481 346 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 EIF3GO75821 320 aaKnown RBP eCLIP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 AQP8O94778 261 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CCNB2O95067 398 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SNAPINO95295 136 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 IGHV3-23P01764 117 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 MBP02144 154 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 APOA1P02647 267 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 FGGP02679 453 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 HPNP05981 417 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 OR8U8P0C7N1 319 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 P0C879 139 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CT45A6P0DMU7 189 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CT45A5P0DMU8 189 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CT45A7P0DMV0 189 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CTRB1P17538 263 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 PTNP21246 168 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CXCR2P25025 360 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 AK4P27144 223 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 GPR6P46095 362 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 GSSP48637 474 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SUB1P53999 127 aaKnown RBP eCLIP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CRISP1P54107 249 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 STX17P56962 302 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 RIPPLY3P57055 190 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF92Q03936 586 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 DMTNQ08495 405 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CDH17Q12864 832 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 TRAM2Q15035 370 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CYTH1Q15438 398 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ATP6AP1Q15904 470 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CT45A1Q5HYN5 189 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 C1orf100Q5SVJ3 147 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CTRB2Q6GPI1 263 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SLC25A25Q6KCM7 469 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ANKRD26P1Q6NSI1 321 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SCARA5Q6ZMJ2 495 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 Q6ZN92 141 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 FAM122BQ7Z309 247 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CMC1Q7Z7K0 106 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CMTM8Q8IZV2 173 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 C6orf223Q8N319 242 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 EID2Q8N6I1 236 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 TRIML2Q8N7C3 387 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 LRRC75AQ8NAA5 344 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 INO80EQ8NBZ0 244 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF740Q8NDX6 193 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 OR5K2Q8NHB8 316 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CT45A3Q8NHU0 189 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 LYPD6BQ8NI32 183 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 CAPSLQ8WWF8 208 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 MYDGFQ969H8 173 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 NEIL2Q969S2 332 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 KIAA1143Q96AT1 154 aaPredicted RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ELSPBP1Q96BH3 223 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 DUS3LQ96G46 650 aaKnown RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 ATP6V1G3Q96LB4 118 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 SH3GL3Q99963 347 aa1.69□□□□□ -2.14
LMNB1-207ENST00000494185 PELOQ9BRX2 385 aaKnown RBP1.69□□□□□ -2.14
LMNB1-207ENST00000494185 UCK2Q9BZX2 261 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms