RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TRMUO75648 421 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SNAP29O95721 258 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 IGHG1P01857 330 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MMP7P09237 267 aaPredicted RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 PATE4P0C8F1 98 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 ACADSP16219 412 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF23P17027 643 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 AQP2P41181 271 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 OR1E2P47887 323 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 TAS2R41P59536 307 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SNTB2Q13425 540 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 FHL1Q13642 323 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 RAB39AQ14964 217 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 CHRFAM7AQ494W8 412 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MMEL1Q495T6 779 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 PODNL1Q6PEZ8 512 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 CXXC5Q7LFL8 322 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 TSEN54Q7Z6J9 526 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MICU2Q8IYU8 434 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 CDK20Q8IZL9 346 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 FAM156AQ8NDB6 213 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 OR2T12Q8NG77 320 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 PFN4Q8NHR9 129 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 TMEM255BQ8WV15 326 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MSI2Q96DH6 328 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SGTBQ96EQ0 304 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 PIMREGQ9BSJ6 248 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MRPL37Q9BZE1 423 aaKnown RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 BPESC1Q9GZL8 116 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MYLK2Q9H1R3 596 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SMURF2Q9HAU4 748 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 MAN2C1Q9NTJ4 1040 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 IGLV3-9A0A075B6K5 115 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ELOVL7A1L3X0 281 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 BLOC1S5-TXNDC5H3BN57 136 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 LMX1BO60663 402 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SERPINI2O75830 405 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 PRSS23O95084 383 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 IGHMP01871 453 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 F13BP05160 661 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ADRA2AP08913 450 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 DAOP14920 347 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF250P15622 560 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 PRDX6P30041 224 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 CAPZA2P47755 286 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 PTDSS1P48651 473 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 DAP3P51398 398 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MNAT1P51948 309 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MRPS11P82912 194 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MRPS34P82930 218 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ST3GAL3Q11203 375 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 TAF11Q15544 211 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ANKDD1AQ495B1 522 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 KRT80Q6KB66 452 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SLC25A47Q6Q0C1 308 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 HACD2Q6Y1H2 254 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 NANOGNBQ7Z5D8 188 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ARPINQ7Z6K5 226 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 PAQR4Q8N4S7 273 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MOSPD2Q8NHP6 518 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 HDAC2Q92769 488 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 NABP1Q96AH0 204 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 RCN3Q96D15 328 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 CMTM5Q96DZ9 223 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 PRRC1Q96M27 445 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF347Q96SE7 839 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SH3GL3Q99963 347 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 HOPXQ9BPY8 73 aaPredicted RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 TXNIPQ9H3M7 391 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MS4A5Q9H3V2 200 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 INIPQ9NRY2 104 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 ARMCX1Q9P291 453 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 GMPR2Q9P2T1 348 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 STX18Q9P2W9 335 aaKnown RBP8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 LPAR3Q9UBY5 353 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 REV1Q9UBZ9 1251 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SLC7A8Q9UHI5 535 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 MED31Q9Y3C7 131 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 SNX13Q9Y5W8 968 aa8.35□□□□□ -1.07
TMEM39A-210ENST00000490099 A0A1W2PRG6 482 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 M0R233 179 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 NME4O00746 187 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 ICMTO60725 284 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 ATP5HO75947 161 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 FARS2O95363 451 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 RAB36O95755 333 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 IFNA2P01563 188 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 ERCC1P07992 297 aaPredicted RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 RPS23P62266 143 aaKnown RBP8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 LIPEQ05469 1076 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 PRKCDQ05655 676 aa8.34□□□□□ -1.07
TMEM39A-210ENST00000490099 GGTLC2Q14390 218 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms