RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 MED25Q71SY5 747 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 PRICKLE2Q7Z3G6 844 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 C9orf40Q8IXQ3 194 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 ARMC10Q8N2F6 343 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 TRMT10AQ8TBZ6 339 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 DIO2Q92813 273 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 KCTD7Q96MP8 289 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 GGACTQ9BVM4 153 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 TMPRSS5Q9H3S3 457 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 ZNF318Q5VUA4 2279 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 TMEM200CA6NKL6 621 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 NTN3O00634 580 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 ANXA8P13928 327 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 PPP3CBP16298 524 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 PDZK1IP1Q13113 114 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 SQSTM1Q13501 440 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 C22orf42Q6IC83 251 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 WDR88Q6ZMY6 472 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 GDF7Q7Z4P5 450 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 OR5M3Q8NGP4 307 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 TMPRSS13Q9BYE2 586 aa16.51■□□□□ 0.23
POLR2J3-205ENST00000489144 ZFHX2Q9C0A1 2572 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 HEATR5AQ86XA9 2040 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 OTOGLQ3ZCN5 2332 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 CDHR4A6H8M9 788 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 C1orf196B1AJZ1 125 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 ZNF879B4DU55 563 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 DBIP07108 87 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 NPR2P20594 1047 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 MST1P26927 711 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 RAG2P55895 527 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 PTGES3Q15185 160 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 BCDIN3DQ7Z5W3 292 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 POMGNT2Q8NAT1 580 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 MORN4Q8NDC4 146 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 SLC41A3Q96GZ6 507 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 ADOQ96SZ5 270 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 FUZQ9BT04 418 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 MKKSQ9NPJ1 570 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 SRPK3Q9UPE1 567 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 POFUT2Q9Y2G5 429 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 MMACHCQ9Y4U1 282 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 KNTC1P50748 2209 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 MASP2O00187 686 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 RPS4Y1P22090 263 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 RAB2AP61019 212 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 RPL13AP3Q6NVV1 102 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 ZCCHC12Q6PEW1 402 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 SEZ6L2Q6UXD5 910 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 PRR18Q8N4B5 295 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 DNAJA3Q96EY1 480 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 EGLN3Q9H6Z9 239 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 RNF122Q9H9V4 155 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 ZMIZ1Q9ULJ6 1067 aa16.5■□□□□ 0.23
POLR2J3-205ENST00000489144 TMEM238LA0A1B0GVL6 79 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 SMIM30A4D0T7 59 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 SYT5O00445 386 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 OIP5O43482 229 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 SAGP10523 405 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 DUSP3P51452 185 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 ELAVL1Q15717 326 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 ZNF511Q8NB15 262 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 BEST4Q8NFU0 473 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 PFN4Q8NHR9 129 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 IL4I1Q96RQ9 567 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 EXOSC3Q9NQT5 275 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 FAM86C1Q9NVL1 165 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 BLACEA4D250 179 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 FAAHO00519 579 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 IGKV3-11P04433 115 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 HTR5AP47898 357 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 AKIRIN2Q53H80 203 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 CLEC12AQ5QGZ9 265 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 PLA2G2CQ5R387 149 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 FAM122BQ7Z309 247 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 NRMQ8IXM6 262 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 RFT1Q96AA3 541 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 PLA2G12AQ9BZM1 189 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 RTN4RQ9BZR6 473 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 POLR2J3Q9H1A7 115 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 NUP210LQ5VU65 1888 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 AHCTF1Q8WYP5 2266 aa16.49■□□□□ 0.23
POLR2J3-205ENST00000489144 LANCL1O43813 399 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 KRT33AO76009 404 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 TFP02787 698 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 NR2C1P13056 603 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 ITGA3P26006 1051 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 ETV5P41161 510 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 OR1Q1Q15612 314 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 UQCC3Q6UW78 93 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 APOOLQ6UXV4 268 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 TMUB2Q71RG4 321 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 TGIF2LXQ8IUE1 241 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 MISPQ8IVT2 679 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 ZPBPQ9BS86 351 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 THAP7Q9BT49 309 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 ULBP3Q9BZM4 244 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 PCDHB10Q9UN67 800 aa16.48■□□□□ 0.23
POLR2J3-205ENST00000489144 C2orf92A0A1B0GVN3 265 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms