RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 RORAP35398 523 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 POLR2IP36954 125 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 EIF1P41567 113 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 GRIA1P42261 906 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MAGEA6P43360 314 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 RPS9P46781 194 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MARCKSL1P49006 195 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NUDT2P50583 147 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PRELPP51888 382 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ARHGDIAP52565 204 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UBE2IP63279 158 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PDZK1IP1Q13113 114 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 STX5Q13190 355 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SNTB2Q13425 540 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ASAH1Q13510 395 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CRMP1Q14194 572 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NEDD8Q15843 81 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF239Q16600 458 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UBE2SQ16763 222 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ADPRMQ3LIE5 342 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HSD17B12Q53GQ0 312 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 AGKQ53H12 422 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UNC50Q53HI1 259 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 VWA2Q5GFL6 755 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PABPC1L2AQ5JQF8 200 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NHLRC3Q5JS37 347 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 LDLRAP1Q5SW96 308 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SPINK14Q6IE38 97 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 LCN8Q6JVE9 175 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 AFTPHQ6ULP2 937 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TEX261Q6UWH6 196 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 C5orf46Q6UWT4 87 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DPY19L2P2Q6ZN68 376 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MOB2Q70IA6 237 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 STRADAQ7RTN6 431 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 GOLGA7Q7Z5G4 137 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 LHFPL3Q86UP9 236 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF573Q86YE8 665 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FAM9CQ8IZT9 166 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CBR4Q8N4T8 237 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 C12orf29Q8N999 325 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 GDPD1Q8N9F7 314 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DNAAF3Q8N9W5 541 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SUMF1Q8NBK3 374 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM35BQ8NCS4 154 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 BPIFB6Q8NFQ5 453 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OR52B4Q8NGK2 314 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OR4F5Q8NH21 305 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MCFD2Q8NI22 146 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF564Q8TBZ8 553 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MAGEE2Q8TD90 523 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ITLN1Q8WWA0 313 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 C1orf54Q8WWF1 131 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 SELENOMQ8WWX9 145 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ELMO1Q92556 727 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FCGR1BQ92637 280 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ROPN1LQ96C74 230 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DCPSQ96C86 337 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 AURKBQ96GD4 344 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 RNF145Q96MT1 663 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FOPNLQ96NB1 174 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DEFB118Q96PH6 123 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 QKIQ96PU8 341 aaKnown RBP eCLIP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OR5M11Q96RB7 305 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CYP2S1Q96SQ9 504 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF251Q9BRH9 671 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 FEM1AQ9BSK4 669 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NDUFAF3Q9BU61 184 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 WRAP53Q9BUR4 548 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UGT2B28Q9BY64 529 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 UCK2Q9BZX2 261 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OR51M1Q9H341 326 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 TDRD3Q9H7E2 651 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 KAT8Q9H7Z6 458 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CRLF2Q9HC73 371 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MCCC2Q9HCC0 563 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 XPNPEP1Q9NQW7 623 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PLSCR3Q9NRY6 295 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 IMP3Q9NV31 184 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 LYARQ9NX58 379 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 USE1Q9NZ43 259 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CNOT2Q9NZN8 540 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 OPTCQ9UBM4 332 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MIOXQ9UGB7 285 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 IL20RAQ9UHF4 553 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 DCDC2Q9UHG0 476 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 CYB5R1Q9UHQ9 305 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 PHF11Q9UIL8 331 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 ANAPC7Q9UJX3 599 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 STAP1Q9ULZ2 295 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 MFHAS1Q9Y4C4 1052 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 U3KQ87 197 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 NHSL1Q5SYE7 1610 aa3.03□□□□□ -1.92
ECHDC1-217ENST00000488087 HCFC1P51610 2035 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 C5P01031 1676 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 A0A0A6YYD4 124 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 A0A0U1RQV5 110 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM92AA1XBS5 289 aa3.02□□□□□ -1.93
ECHDC1-217ENST00000488087 PP2D1A8MPX8 630 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms