RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 OR13C2Q8NGS9 318 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SLC7A13Q8TCU3 470 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 NMD3Q96D46 503 aaKnown RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SORCS2Q96PQ0 1159 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CCT8L2Q96SF2 557 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 RHNO1Q9BSD3 238 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ANKRD19PQ9H560 264 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF442Q9H7R0 627 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 GORASP2Q9H8Y8 452 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 CD300AQ9UGN4 299 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 SAMD4AQ9UPU9 718 aaKnown RBP11.15□□□□□ -0.62
HDAC1-209ENST00000484305 ABCA1O95477 2261 aa11.15□□□□□ -0.62
HDAC1-209ENST00000484305 NAV3Q8IVL0 2385 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 A0A1W2PRQ8 180 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 TMEM129A0AVI4 362 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 DYNC1I1O14576 645 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 SEMG1P04279 462 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 SERPINA5P05154 406 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 ZNF26P17031 533 aaPredicted RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 RHCEP18577 417 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 NPR2P20594 1047 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 CDAP32320 146 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 SLC9A3P48764 834 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 ZNF84P51523 738 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 DGCR6Q14129 220 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 TAF11Q15544 211 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 MSMPQ1L6U9 139 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 C10orf128Q5T292 105 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 PODNL1Q6PEZ8 512 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 CLEC2AQ6UVW9 174 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 RRM2BQ7LG56 351 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 SLC16A14Q7RTX9 510 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 CDK20Q8IZL9 346 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 DEFB107AQ8IZN7 70 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 LRRC18Q8N456 261 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 FITM2Q8N6M3 262 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 TSPAN32Q96QS1 320 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 VRK1Q99986 396 aaPredicted RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 RNF121Q9H920 327 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 STX18Q9P2W9 335 aaKnown RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
HDAC1-209ENST00000484305 UGT2A1Q9Y4X1 527 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 V9GYQ6 96 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
HDAC1-209ENST00000484305 A0A096LNT2 108 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 TRBV4-1A0A0J9YWV2 114 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 ARPC2O15144 300 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 GPRIN2O60269 458 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 ENTPD5O75356 428 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 DSCR9P59020 149 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 MRPS34P82930 218 aaKnown RBP11.13□□□□□ -0.63
HDAC1-209ENST00000484305 MXRA7P84157 204 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 CD47Q08722 323 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SEC23BQ15437 767 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 ANKDD1AQ495B1 522 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SLC36A2Q495M3 483 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 ZBED5Q49AG3 693 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 FGD3Q5JSP0 725 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SAMD4BQ5PRF9 694 aaKnown RBP11.13□□□□□ -0.63
HDAC1-209ENST00000484305 TMEM53Q6P2H8 277 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 C16orf89Q6UX73 402 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SVOPLQ8N434 492 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 ZNF519Q8TB69 540 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 FAM168AQ92567 244 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 NSMAFQ92636 917 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 PYURFQ96I23 114 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 FAM46AQ96IP4 442 aaKnown RBP11.13□□□□□ -0.63
HDAC1-209ENST00000484305 DOK1Q99704 481 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SMURF2Q9HAU4 748 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 MAGEL2Q9UJ55 1249 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 FBXL3Q9UKT7 428 aa11.13□□□□□ -0.63
HDAC1-209ENST00000484305 SH3PXD2BA1X283 911 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 MMP7P09237 267 aaPredicted RBP11.12□□□□□ -0.63
HDAC1-209ENST00000484305 CCL2P13500 99 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 PPOXP50336 477 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 ERVK-25P63136 954 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 GALK2Q01415 458 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 SGCAQ16586 387 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 THEM4Q5T1C6 240 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 SLC25A47Q6Q0C1 308 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 DPPA2Q7Z7J5 298 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
HDAC1-209ENST00000484305 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
HDAC1-209ENST00000484305 SLC30A7Q8NEW0 376 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 OR52J3Q8NH60 311 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 C10orf105Q8TEF2 133 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 NABP1Q96AH0 204 aa11.12□□□□□ -0.63
HDAC1-209ENST00000484305 DHRS1Q96LJ7 313 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms