RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 MOGAT1Q96PD6 335 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 RMND5AQ9H871 391 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 BEX1Q9HBH7 125 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 SLC6A13Q9NSD5 602 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 LGALS13Q9UHV8 139 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 CMYA5Q8N3K9 4069 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 C11orf98E9PRG8 122 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 DHHO43323 396 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 ADH4P08319 380 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 ADORA3P0DMS8 318 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 OMGP23515 440 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 LIPAP38571 399 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 MMP15P51511 669 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 HSF2Q03933 536 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 TMEM155Q4W5P6 130 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 NHLRC1Q6VVB1 395 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 WDR88Q6ZMY6 472 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 OR52E2Q8NGJ4 325 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 IPCEF1Q8WWN9 437 aaPredicted RBP13.59□□□□□ -0.23
DDX56-210ENST00000479440 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
DDX56-210ENST00000479440 UBE2FQ969M7 185 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 RAD21L1Q9H4I0 556 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 TMEM27Q9HBJ8 222 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 NPHS2Q9NP85 383 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 A4GALTQ9NPC4 353 aa13.59□□□□□ -0.23
DDX56-210ENST00000479440 WDR91A4D1P6 747 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 ZSCAN5BA6NJL1 495 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 GPANK1O95872 356 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 CD55P08174 381 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SBK2P0C263 348 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 ETS2P15036 469 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SLC1A6P48664 564 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 ZNF84P51523 738 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 RAG2P55895 527 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 IFFO1Q0D2I5 559 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 ESCO2Q56NI9 601 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SWT1Q5T5J6 900 aaKnown RBP13.58□□□□□ -0.24
DDX56-210ENST00000479440 DHRS4L2Q6PKH6 230 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 MSANTD1Q6ZTZ1 278 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SLC35D2Q76EJ3 337 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SLC25A44Q96H78 314 aaPredicted RBP13.58□□□□□ -0.24
DDX56-210ENST00000479440 ITCHQ96J02 903 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SORT1Q99523 831 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 SLC19A3Q9BZV2 496 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 PATZ1Q9HBE1 687 aaKnown RBP13.58□□□□□ -0.24
DDX56-210ENST00000479440 PDP1Q9P0J1 537 aaPredicted RBP13.58□□□□□ -0.24
DDX56-210ENST00000479440 EIF3KQ9UBQ5 218 aaKnown RBP13.58□□□□□ -0.24
DDX56-210ENST00000479440 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 ZDHHC8Q9ULC8 765 aa13.58□□□□□ -0.24
DDX56-210ENST00000479440 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 A0A1B0GX12 115 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 LRRN3E7EW58 273 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 H3BSA7 217 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TYROBPO43914 113 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 CRYBA1P05813 215 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 CCNOP22674 350 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 SLC6A9P48067 706 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
DDX56-210ENST00000479440 FADDQ13158 208 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 MELKQ14680 651 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 GTDC1Q4AE62 458 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 C6orf10Q5SRN2 563 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 CEP85LQ5SZL2 805 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 SPATA46Q5T0L3 261 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 MBNL2Q5VZF2 373 aaKnown RBP13.57□□□□□ -0.24
DDX56-210ENST00000479440 HIST2H2BDQ6DRA6 164 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 BTNL3Q6UXE8 466 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
DDX56-210ENST00000479440 KRT73Q86Y46 540 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 GEMIN6Q8WXD5 167 aaKnown RBP13.57□□□□□ -0.24
DDX56-210ENST00000479440 VPS33AQ96AX1 596 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 CITED1Q99966 193 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 KCNN2Q9H2S1 579 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TMEM106BQ9NUM4 274 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 IL20RAQ9UHF4 553 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TANC2Q9HCD6 1990 aa13.57□□□□□ -0.24
DDX56-210ENST00000479440 TRAV40A0A0B4J280 105 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 BIRC5O15392 142 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 RNF13O43567 381 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 MGRN1O60291 552 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 SLC22A3O75751 556 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 TGDSO95455 350 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 IGHG1P01857 330 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 QDPRP09417 244 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 PGA4P0DJD7 388 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 PGA3P0DJD8 388 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 IGHV4-38-2P0DP08 117 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 MPV17P39210 176 aa13.56□□□□□ -0.24
DDX56-210ENST00000479440 CLRN1P58418 232 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms