RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMEM255BQ8WV15 326 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 TMEM239Q8WW34 195 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 SGTBQ96EQ0 304 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 INIPQ9NRY2 104 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 GPR160Q9UJ42 338 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 RIMS3Q9UJD0 308 aa18.05■□□□□ 0.48
VSX1-206ENST00000444511 IQCMA0A1B0GVH7 501 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 CENPBD1B2RD01 187 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 FXYD1O00168 92 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 MRASO14807 208 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 NPPAP01160 153 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 ACADSP16219 412 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 ACHEP22303 614 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 COL8A2P25067 703 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 SRP14P37108 136 aaKnown RBP18.04■□□□□ 0.48
VSX1-206ENST00000444511 AQP2P41181 271 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 PIN1Q13526 163 aaPredicted RBP18.04■□□□□ 0.48
VSX1-206ENST00000444511 COQ5Q5HYK3 327 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 PAQR4Q8N4S7 273 aaPredicted RBP18.04■□□□□ 0.48
VSX1-206ENST00000444511 RBM15BQ8NDT2 890 aaKnown RBP18.04■□□□□ 0.48
VSX1-206ENST00000444511 OR1J2Q8NGS2 313 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 ASB10Q8WXI3 467 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 C1orf159Q96HA4 380 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 C19orf24Q9BVV8 132 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 MRPL13Q9BYD1 178 aaKnown RBP18.04■□□□□ 0.48
VSX1-206ENST00000444511 LRMDAQ9H2I8 198 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 OR51B6Q9H340 312 aa18.04■□□□□ 0.48
VSX1-206ENST00000444511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.04■□□□□ 0.48
VSX1-206ENST00000444511 BBIP1A8MTZ0 92 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 TRMUO75648 421 aaKnown RBP18.03■□□□□ 0.48
VSX1-206ENST00000444511 IGF2P01344 180 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 LCKP06239 509 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 PCMT1P22061 227 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 OR1E2P47887 323 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 KLF3P57682 345 aaPredicted RBP18.03■□□□□ 0.48
VSX1-206ENST00000444511 KLF10Q13118 480 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 MAPRE2Q15555 327 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 ALKBH6Q3KRA9 238 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 LIPNQ5VXI9 398 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 LRRC18Q8N456 261 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 SEPHS2Q99611 448 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 KCNN2Q9H2S1 579 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 NARFLQ9H6Q4 476 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 C20orf141Q9NUB4 165 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 TAAR3PQ9P1P4 343 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 STX18Q9P2W9 335 aaKnown RBP18.03■□□□□ 0.48
VSX1-206ENST00000444511 MED31Q9Y3C7 131 aa18.03■□□□□ 0.48
VSX1-206ENST00000444511 B4DSR2 109 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 SNAP29O95721 258 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 CLPTM1O96005 669 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 SAGP10523 405 aaPredicted RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 THRBP10828 461 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 H2AFXP16104 143 aaPredicted RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 RAD52P43351 418 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 ARFIP2P53365 341 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 DVL1P1P54792 670 aaPredicted RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 TMEM33P57088 247 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 MRPS11P82912 194 aaKnown RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 HSF2Q03933 536 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 LRRC23Q53EV4 343 aaPredicted RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 TMEM154Q6P9G4 183 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 ICA1LQ8NDH6 482 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 MOSPD2Q8NHP6 518 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 CLDND2Q8NHS1 167 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 SYNPRQ8TBG9 265 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 C10orf82Q8WW14 230 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 C11orf40Q8WZ69 217 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 ZNF583Q96ND8 569 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 ZNF416Q9BWM5 594 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 BCL2L14Q9BZR8 327 aa18.02■□□□□ 0.48
VSX1-206ENST00000444511 ZNF275Q9NSD4 429 aaPredicted RBP18.02■□□□□ 0.48
VSX1-206ENST00000444511 PPIHO43447 177 aaKnown RBP18.01■□□□□ 0.47
VSX1-206ENST00000444511 MGRN1O60291 552 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 NCR1O76036 304 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 ZNF250P15622 560 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 APLNRP35414 380 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 UCP2P55851 309 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 SF3A3Q12874 501 aaKnown RBP eCLIP18.01■□□□□ 0.47
VSX1-206ENST00000444511 CYBRD1Q53TN4 286 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 C10orf128Q5T292 105 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 GLCCI1Q86VQ1 547 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 ZNF519Q8TB69 540 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 LIPHQ8WWY8 451 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 YIPF5Q969M3 257 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 SIAEQ9HAT2 523 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 CCNB1IP1Q9NPC3 277 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 HINT3Q9NQE9 182 aaKnown RBP18.01■□□□□ 0.47
VSX1-206ENST00000444511 SAR1AQ9NR31 198 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 GID8Q9NWU2 228 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 SLCO1C1Q9NYB5 712 aa18.01■□□□□ 0.47
VSX1-206ENST00000444511 LOC100653049A0A140TA62 436 aa18■□□□□ 0.47
VSX1-206ENST00000444511 C17orf100A8MU93 164 aa18■□□□□ 0.47
VSX1-206ENST00000444511 KRT34O76011 436 aa18■□□□□ 0.47
VSX1-206ENST00000444511 SLC2A10O95528 541 aa18■□□□□ 0.47
VSX1-206ENST00000444511 MMP7P09237 267 aaPredicted RBP18■□□□□ 0.47
VSX1-206ENST00000444511 IFNA8P32881 189 aa18■□□□□ 0.47
VSX1-206ENST00000444511 KDELR2P33947 212 aa18■□□□□ 0.47
VSX1-206ENST00000444511 MAGEB1P43366 347 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms