RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 VSTM5A8MXK1 200 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 CD5LO43866 347 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 FARS2O95363 451 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 SAGP10523 405 aaPredicted RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 SLC25A16P16260 332 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 CDAP32320 146 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 ZNF84P51523 738 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 RPL27P61353 136 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 PPP2R2BQ00005 443 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 FMODQ06828 376 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 LOXL1Q08397 574 aaPredicted RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 TOP3AQ13472 1001 aaPredicted RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 FXNQ16595 210 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 NRN1LQ496H8 165 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 ZNF730Q6ZMV8 503 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 MBOAT2Q6ZWT7 520 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 OAFQ86UD1 273 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 RNF113BQ8IZP6 322 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 PAQR4Q8N4S7 273 aaPredicted RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 CLDN22Q8N7P3 220 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 FAM156AQ8NDB6 213 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 OR13C2Q8NGS9 318 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 C7orf34Q96L11 122 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 MRPL37Q9BZE1 423 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 DCAF13Q9NV06 445 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 FBXL3Q9UKT7 428 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 CMAHPQ9Y471 501 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 FKBP7Q9Y680 259 aa15.26■□□□□ 0.03
LSM5-204ENST00000409909 CHD3Q12873 2000 aaKnown RBP15.26■□□□□ 0.03
LSM5-204ENST00000409909 EFCAB9A8MZ26 197 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 VWC2LB2RUY7 222 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 CDC42EP2O14613 210 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 ENTPD5O75356 428 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 IGHMP01871 453 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 TP53P04637 393 aaPredicted RBP15.25■□□□□ 0.03
LSM5-204ENST00000409909 MMP7P09237 267 aaPredicted RBP15.25■□□□□ 0.03
LSM5-204ENST00000409909 CSF3P09919 207 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 ZNF26P17031 533 aaPredicted RBP15.25■□□□□ 0.03
LSM5-204ENST00000409909 GLRXP35754 106 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 GPR4P46093 362 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 CTXN1P60606 82 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 TAF11Q15544 211 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 SLC25A47Q6Q0C1 308 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 PRIMA1Q86XR5 153 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 LRRC18Q8N456 261 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 SLC7A13Q8TCU3 470 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 MRPL24Q96A35 216 aaKnown RBP15.25■□□□□ 0.03
LSM5-204ENST00000409909 NABP1Q96AH0 204 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 FOXN4Q96NZ1 517 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 TSPAN32Q96QS1 320 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 RNF121Q9H920 327 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 SIAEQ9HAT2 523 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 ARL8BQ9NVJ2 186 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 NDUFAF4Q9P032 175 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 STX18Q9P2W9 335 aaKnown RBP15.25■□□□□ 0.03
LSM5-204ENST00000409909 RPS6KA6Q9UK32 745 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 ARL2BPQ9Y2Y0 163 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 SPEF1Q9Y4P9 236 aa15.25■□□□□ 0.03
LSM5-204ENST00000409909 ADRA2AP08913 450 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 CCL2P13500 99 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 PDLIM4P50479 330 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 MRPS34P82930 218 aaKnown RBP15.24■□□□□ 0.03
LSM5-204ENST00000409909 TMEM249Q2WGJ8 235 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 SLC36A2Q495M3 483 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 TMEM53Q6P2H8 277 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 PODNL1Q6PEZ8 512 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 TMPRSS11FQ6ZWK6 438 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 DPPA2Q7Z7J5 298 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 LRP11Q86VZ4 500 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 CYP4Z1Q86W10 505 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 SLC30A7Q8NEW0 376 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 ZNF519Q8TB69 540 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 NSMAFQ92636 917 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 ALG12Q9BV10 488 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 RAB1BQ9H0U4 201 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 ANKRD19PQ9H560 264 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 SMURF2Q9HAU4 748 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 FBXO9Q9UK97 447 aaPredicted RBP15.24■□□□□ 0.03
LSM5-204ENST00000409909 SVEP1Q4LDE5 3571 aa15.24■□□□□ 0.03
LSM5-204ENST00000409909 A0A1W2PRQ8 180 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 TLX2O43763 284 aaPredicted RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 CRLF1O75462 422 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 TCN1P20061 433 aaPredicted RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 USF1P22415 310 aaPredicted RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 MSX2P35548 267 aaPredicted RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 SLC9A3P48764 834 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 EVX1P49640 407 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 VLDLRP98155 873 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 GALK2Q01415 458 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 CD47Q08722 323 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 DGCR6Q14129 220 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 ANKDD1AQ495B1 522 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 IQCCQ4KMZ1 466 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 GKAP1Q5VSY0 366 aaPredicted RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 CPEB3Q8NE35 698 aaKnown RBP15.23■□□□□ 0.03
LSM5-204ENST00000409909 SYT3Q9BQG1 590 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 GORASP2Q9H8Y8 452 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 YAE1D1Q9NRH1 226 aa15.23■□□□□ 0.03
LSM5-204ENST00000409909 MYEF2Q9P2K5 600 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms