RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 C1orf189Q5VU69 101 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 KRT77Q7Z794 578 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 TMPRSS12Q86WS5 348 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SIX5Q8N196 739 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 OR52I2Q8NH67 350 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 STT3BQ8TCJ2 826 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 DUSP19Q8WTR2 217 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 ZNF524Q96C55 264 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 DDIT4LQ96D03 193 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 NXPE2Q96DL1 559 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 UTP23Q9BRU9 249 aaKnown RBP16.3■□□□□ 0.2
CD40-201ENST00000372276 POTEKPQ9BYX7 375 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 C20orf85Q9H1P6 137 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 GPN1Q9HCN4 374 aaPredicted RBP16.3■□□□□ 0.2
CD40-201ENST00000372276 ZNF222Q9UK12 451 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 BOLA1Q9Y3E2 137 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SPAG17Q6Q759 2223 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 SEC16AO15027 2179 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 FABP7O15540 132 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 SLC16A7O60669 478 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 GLSO94925 669 aaPredicted RBP16.29■□□□□ 0.2
CD40-201ENST00000372276 MT-ND4P03905 459 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 C4BPBP20851 252 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 SOX2P48431 317 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 TAS2R20P59543 309 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 MEP1BQ16820 701 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 COL28A1Q2UY09 1125 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 PRSS45Q7RTY3 260 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 TSEN15Q8WW01 171 aaKnown RBP16.29■□□□□ 0.2
CD40-201ENST00000372276 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
CD40-201ENST00000372276 FOXQ1Q9C009 403 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 PISDQ9UG56 409 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 SCP2D1Q9UJQ7 156 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 HSPB11Q9Y547 144 aa16.29■□□□□ 0.2
CD40-201ENST00000372276 ETV2O00321 342 aaPredicted RBP16.28■□□□□ 0.2
CD40-201ENST00000372276 AQP8O94778 261 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 IL5P05113 134 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 CSF1P09603 554 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 CDK2P24941 298 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 MECP2P51608 486 aaKnown RBP16.28■□□□□ 0.2
CD40-201ENST00000372276 PUDPQ08623 228 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 GLT8D1Q68CQ7 371 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 ANKRD16Q6P6B7 361 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 POMZP3Q6PJE2 187 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 ESPNLQ6ZVH7 1005 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 H1FNTQ75WM6 255 aaPredicted RBP16.28■□□□□ 0.2
CD40-201ENST00000372276 ANKRD37Q7Z713 158 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 BPHLQ86WA6 291 aaPredicted RBP16.28■□□□□ 0.2
CD40-201ENST00000372276 PRSS35Q8N3Z0 413 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 ZNF431Q8TF32 576 aaPredicted RBP16.28■□□□□ 0.2
CD40-201ENST00000372276 GIMAP1Q8WWP7 306 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 FANCFQ9NPI8 374 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 KCNG2Q9UJ96 466 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 RCE1Q9Y256 329 aa16.28■□□□□ 0.2
CD40-201ENST00000372276 TP53BP1Q12888 1972 aaPredicted RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 C4orf47A7E2U8 309 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 FTCDNL1E5RQL4 147 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 SSNA1O43805 119 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 ALOX12BO75342 701 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 RBBP9O75884 186 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 HRGP04196 525 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 GIMD1P0DJR0 217 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 CPN1P15169 458 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 ZNF823P16415 610 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 ADRA2CP18825 462 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 FSTP19883 344 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 FKBP2P26885 142 aaKnown RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 KIR3DL2P43630 455 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 CCR6P51684 374 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 GNG2P59768 71 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 ADAM8P78325 824 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 INSM1Q01101 510 aaPredicted RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 NR0B2Q15466 257 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 RAB11BQ15907 218 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 WDR38Q5JTN6 314 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 C1QL3Q5VWW1 255 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 ZNF704Q6ZNC4 412 aaPredicted RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 COX15Q7KZN9 410 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 GLB1L2Q8IW92 636 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 PRSS58Q8IYP2 241 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 NFAM1Q8NET5 270 aaPredicted RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 C8orf44Q96CB5 159 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 AUNIPQ9H7T9 357 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 C19orf25Q9UFG5 118 aaPredicted RBP16.27■□□□□ 0.2
CD40-201ENST00000372276 DHDHQ9UQ10 334 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 NPTNQ9Y639 398 aa16.27■□□□□ 0.2
CD40-201ENST00000372276 RP1P56715 2156 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 A0A0A6YYH2 397 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 A6NJ64 397 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 SNRPGP15A8MWD9 76 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 NPIPA5E9PKD4 350 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 SULT1C2O00338 296 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 SLC17A2O00624 439 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 SPARCP09486 303 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 CD37P11049 281 aa16.27■□□□□ 0.19
CD40-201ENST00000372276 BCKDHBP21953 392 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms