RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FARSAQ9Y285 508 aaKnown RBP17.97■□□□□ 0.47
CRLF3-201ENST00000324238 KIF26BQ2KJY2 2108 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 DCDC2BA2VCK2 349 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF749O43361 778 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SDC3O75056 442 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 MPZL1O95297 269 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 RNH1P13489 461 aaKnown RBP17.97■□□□□ 0.47
CRLF3-201ENST00000324238 CAPZA2P47755 286 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 EIF2B5Q13144 721 aaKnown RBP17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SLC35D3Q5M8T2 416 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 LIN54Q6MZP7 749 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 MARVELD3Q96A59 401 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 UBE2QL1A1L167 161 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 GGT3PA6NGU5 568 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 EFCAB7A8K855 629 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ACHEP22303 614 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SDHAP31040 664 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 RGS7BPQ6MZT1 257 aaPredicted RBP17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ATRAIDQ6UW56 229 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 CFAP77Q6ZQR2 320 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SLC36A1Q7Z2H8 476 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 ZNF227Q86WZ6 799 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 SPICQ8N5J4 248 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 OR2AK2Q8NG84 335 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 G6PC3Q9BUM1 346 aa17.97■□□□□ 0.47
CRLF3-201ENST00000324238 MFSD2BA6NFX1 497 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 H7C417 338 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 CCSO14618 274 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 OR2A4O95047 310 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 RLN2P04090 185 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 HIST1H2ABP04908 130 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 CALCBP10092 127 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 HIST3H2AQ7L7L0 130 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 CDC20BQ86Y33 519 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 EXD3Q8N9H8 876 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 ST8SIA4Q92187 359 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 HIST1H2ACQ93077 130 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 LCORQ96JN0 433 aaPredicted RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 OR2A7Q96R45 310 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 MTFP1Q9UDX5 166 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 GPR160Q9UJ42 338 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 C17orf105B2RV13 164 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 PRAMEF2O60811 474 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 RP2O75695 350 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 SPARCP09486 303 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 APEHP13798 732 aaKnown RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 OR1D4P47884 311 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 GFERP55789 205 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 DMWDQ09019 674 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 NKPD1Q17RQ9 610 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 ATG4DQ86TL0 474 aaPredicted RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 LRRC75AQ8NAA5 344 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 MRPL48Q96GC5 212 aaKnown RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 SEC22AQ96IW7 307 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 TGM7Q96PF1 710 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 MFRPQ9BY79 579 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 TINAGL1Q9GZM7 467 aaPredicted RBP17.96■□□□□ 0.47
CRLF3-201ENST00000324238 STEAP1Q9UHE8 339 aa17.96■□□□□ 0.47
CRLF3-201ENST00000324238 XRCC3O43542 346 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 IGHV4-34P06331 123 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 ALOX5APP20292 161 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 ASPHD2Q6ICH7 369 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 COMMD4Q9H0A8 199 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 SLC22A23A1A5C7 686 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 F5H5P2 479 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 HCRTR2O43614 444 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 DLX5P56178 289 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 RBMS2Q15434 407 aaKnown RBP17.95■□□□□ 0.46
CRLF3-201ENST00000324238 KLHL26Q53HC5 615 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 MARCH3Q86UD3 253 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 OR51A2Q8NGJ7 313 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 GPR148Q8TDV2 347 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 POFUT1Q9H488 388 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 HIF3AQ9Y2N7 669 aa17.95■□□□□ 0.46
CRLF3-201ENST00000324238 TRIM77I1YAP6 450 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 LMX1BO60663 402 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 ALOX12BO75342 701 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 MYF5P13349 255 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 CPN1P15169 458 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF28P17035 718 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 TAGLNQ01995 201 aaKnown RBP17.94■□□□□ 0.46
CRLF3-201ENST00000324238 MFGE8Q08431 387 aaPredicted RBP17.94■□□□□ 0.46
CRLF3-201ENST00000324238 SCGB2B2Q4G0G5 96 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 WBP2NLQ6ICG8 309 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 TSLPQ969D9 159 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 FAM3DQ96BQ1 224 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 B9D1Q9UPM9 204 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 PCDH15Q96QU1 1955 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 TRBV5-5A0A0J9YX44 114 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 ATP6V1G2-DDX39BF2Z307 99 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 SULT1B1O43704 296 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 UBE2IP63279 158 aaKnown RBP17.94■□□□□ 0.46
CRLF3-201ENST00000324238 SLC6A19Q695T7 634 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 GSG1LQ6UXU4 331 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 C19orf47Q8N9M1 422 aaKnown RBP17.94■□□□□ 0.46
CRLF3-201ENST00000324238 OR4S1Q8NGB4 309 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 HOXB13Q92826 284 aaPredicted RBP17.94■□□□□ 0.46
CRLF3-201ENST00000324238 CYYR1Q96J86 154 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 INTS14Q96SY0 518 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms