RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TMEM184BQ9Y519 407 aaPredicted RBP14.3□□□□□ -0.12
CTDSP1-201ENST00000273062 PLXNA2O75051 1894 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 F8VVB4 439 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 F8VWA3 439 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 H7C417 338 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 ARL6IP5O75915 188 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 EN2P19622 333 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 NHLH2Q02577 135 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 OVCH1Q7RTY7 1134 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 TRAM1L1Q8N609 369 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 OR56B1Q8NGI3 324 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 TFGQ92734 400 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 DNAH14Q0VDD8 3507 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 MCIDASD6RGH6 385 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 FCGR3AP08637 254 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 ZNF25P17030 456 aaPredicted RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 SULT1A1P50225 295 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 FOXO1Q12778 655 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 SLC9A5Q14940 896 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 PRPF38BQ5VTL8 546 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 CYB561A3Q8NBI2 242 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 TMEM255BQ8WV15 326 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 MALSU1Q96EH3 234 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 C1orf198Q9H425 327 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 ADGRL4Q9HBW9 690 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 STEAP1Q9UHE8 339 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 LAMP5Q9UJQ1 280 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 NOP16Q9Y3C1 178 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 EYSQ5T1H1 3165 aa14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
CTDSP1-201ENST00000273062 TSPAN11A1L157 253 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 NUDT19A8MXV4 375 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PSMD9O00233 223 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MFNGO00587 321 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 NPSP0C0P6 89 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MPC1LP0DKB6 136 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 RNH1P13489 461 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PSMB10P40306 273 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 RPS10P46783 165 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ZNF84P51523 738 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 FXYD6P3P58550 94 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 DUSP5Q16690 384 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 LINC00471Q8N535 108 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 GLYATL1Q969I3 302 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ZG16BQ96DA0 208 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 TEX101Q9BY14 249 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ACTRT3Q9BYD9 372 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CRLF2Q9HC73 371 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 KLHL42Q9P2K6 505 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PLXND1Q9Y4D7 1925 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 OR52A4PA6NMU1 304 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CTNSO60931 367 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 GLSO94925 669 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 THY1P04216 161 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SERPINA5P05154 406 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 NR2F1P10589 423 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CD34P28906 385 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 FAUP35544 74 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PRKXP51817 358 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SLBPQ14493 270 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ATPAF1Q5TC12 328 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ANGPTL5Q86XS5 388 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CCDC116Q8IYX3 515 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 OTUB2Q96DC9 234 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PELI1Q96FA3 418 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 RBM18Q96H35 190 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 RAB33BQ9H082 229 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 TRPV4Q9HBA0 871 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 DUSP22Q9NRW4 184 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MED17Q9NVC6 651 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MMP24Q9Y5R2 645 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 A8MWP6 167 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 GLCEO94923 617 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PMS2P2O95744 297 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 IFNA17P01571 189 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ITGB2P05107 769 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 CHRM4P08173 479 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SBK2P0C263 348 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ADPRHP54922 357 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MANFP55145 182 aaKnown RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SLC26A5P58743 744 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 HNRNPKP61978 463 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■□□□□ 9.1
CTDSP1-201ENST00000273062 TMEM115Q12893 351 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 TSTA3Q13630 321 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 TMEM220Q6QAJ8 160 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 LCTLQ6UWM7 567 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ZNF836Q6ZNA1 936 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 GID4Q8IVV7 300 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MAFIPQ8WZ33 124 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 ARRDC3Q96B67 414 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SMIM19Q96E16 107 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms