RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CD46P15529 392 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF182P17025 639 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-201ENST00000238688 CD96P40200 585 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 CRYBB2P43320 205 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-201ENST00000238688 RAC3P60763 192 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 GPR85P60893 370 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 SPCS2Q15005 226 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 MOGQ16653 247 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 TEX30Q5JUR7 227 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 THEM4Q5T1C6 240 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 LIPKQ5VXJ0 399 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 RAET1LQ5VY80 246 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF544Q6NX49 715 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 RPL22L1Q6P5R6 122 aaKnown RBP11.79□□□□□ -0.52
SLIRP-201ENST00000238688 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-201ENST00000238688 FAM220AQ7Z4H9 259 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 MDGA2Q7Z553 956 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 CROCCP3Q8IVE0 287 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 TIGD4Q8IY51 512 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 ATP6V1C2Q8NEY4 427 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 OR6K6Q8NGW6 343 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 OR6X1Q8NH79 312 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 TM9SF4Q92544 642 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 HAS2Q92819 552 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 INTS12Q96CB8 462 aaKnown RBP11.79□□□□□ -0.52
SLIRP-201ENST00000238688 KCTD7Q96MP8 289 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 RBP7Q96R05 134 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 DCUN1D5Q9BTE7 237 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 WDR76Q9H967 626 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 UNC79Q9P2D8 2635 aa11.79□□□□□ -0.52
SLIRP-201ENST00000238688 GTF3C1Q12789 2109 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 A0A1W2PQL4 384 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 OR5H15A6NDH6 313 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 C11orf98E9PRG8 122 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 AGFG2O95081 481 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 HPNP05981 417 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 PAX7P23759 505 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 P2RY4P51582 365 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 OR2B6P58173 313 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 VBP1P61758 197 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF85Q03923 595 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 FOXO1Q12778 655 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 OR1C1Q15619 314 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 BCL2A1Q16548 175 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 TMEM176BQ3YBM2 270 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 GXYLT1Q4G148 440 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 OR2G6Q5TZ20 316 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF468Q5VIY5 522 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 B3GNTL1Q67FW5 361 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 RHOUQ7L0Q8 258 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 ZNF227Q86WZ6 799 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 CDC20BQ86Y33 519 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 TMEM99Q8N816 258 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 TMEM178AQ8NBL3 297 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 MDS2Q8NDY4 140 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 OR2M7Q8NG81 312 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 SSC4DQ8WTU2 575 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 SPRYD4Q8WW59 207 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 GATAD2BQ8WXI9 593 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 SLC25A44Q96H78 314 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 GNRHR2Q96P88 292 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 CHCHD6Q9BRQ6 235 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 SYT4Q9H2B2 425 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 HMG20AQ9NP66 347 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 ERRFI1Q9UJM3 462 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 B9D1Q9UPM9 204 aa11.78□□□□□ -0.52
SLIRP-201ENST00000238688 SF3B6Q9Y3B4 125 aaKnown RBP11.78□□□□□ -0.52
SLIRP-201ENST00000238688 A0A075B6Q4 140 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 IGLV1-36A0A0B4J1U3 117 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 LOC100506127A0A0U1RQW1 187 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 OGG1O15527 345 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 NME2P1O60361 137 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 TMCC2O75069 709 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 KHDRBS3O75525 346 aaKnown RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 GATBO75879 557 aaKnown RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 AQP8O94778 261 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF432O94892 652 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 CLUP10909 449 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF43P17038 809 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 NME2P22392 152 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 B3GALT5-AS1P59052 145 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 NCS1P62166 190 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 POU3F1Q03052 451 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF169Q14929 603 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 PCK2Q16822 640 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 TMEM225Q6GV28 225 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 KCTD18Q6PI47 426 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 NHLRC1Q6VVB1 395 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms