RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FAM220AQ7Z4H9 259 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 GALNTL5Q7Z4T8 443 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 GGNQ86UU5 652 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 WDFY1Q8IWB7 410 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 NOXO1Q8NFA2 376 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 OTOSQ8NHW6 89 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 HAVCR2Q8TDQ0 301 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 RBP7Q96R05 134 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 ACOXLQ9NUZ1 547 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 COA3Q9Y2R0 106 aaPredicted RBP16.19■□□□□ 0.18
VIM-201ENST00000224237 SLC35F4A4IF30 521 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 GABRPO00591 440 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 EIF1AYO14602 144 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 MAGEB4O15481 346 aaPredicted RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 KHDRBS3O75525 346 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 PGA4P0DJD7 388 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 PGA3P0DJD8 388 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 KLK2P20151 261 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 POU3F2P20265 443 aaPredicted RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 ALOX5APP20292 161 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 RFC3P40938 356 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 CD97P48960 835 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 AGFG1P52594 562 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 CLDN20P56880 219 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 CLRN1P58418 232 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 SIRPAP78324 504 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 ZNF404Q494X3 552 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 THEM4Q5T1C6 240 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 ZNF684Q5T5D7 378 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 RPTNQ6XPR3 784 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MCFD2Q8NI22 146 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 FNDC8Q8TC99 324 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MFRPQ9BY79 579 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.18■□□□□ 0.18
VIM-201ENST00000224237 KCNN2Q9H2S1 579 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MRPL22Q9NWU5 206 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 ST6GALNAC2Q9UJ37 374 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 A3GALT2U3KPV4 340 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 METTL15A6NJ78 407 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 RGS9O75916 674 aaPredicted RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 TACSTD2P09758 323 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MEOX1P50221 254 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 ADAM8P78325 824 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 PLGLB1Q02325 96 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MRPL28Q13084 256 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 CDK5R1Q15078 307 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 HBMQ6B0K9 141 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 RPL22L1Q6P5R6 122 aaKnown RBP16.18■□□□□ 0.18
VIM-201ENST00000224237 SMIM19Q96E16 107 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 PGLYRP3Q96LB9 341 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 HDHD5Q9BXW7 423 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 MMP27Q9H306 513 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 KLHDC2Q9Y2U9 406 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 GRIP1Q9Y3R0 1128 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 KIAA1549Q9HCM3 1950 aa16.18■□□□□ 0.18
VIM-201ENST00000224237 ZNF726A6NNF4 738 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 NPIPA2E9PIF3 369 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 NPIPA3F8WFD2 350 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 ZNF593O00488 134 aaPredicted RBP16.17■□□□□ 0.18
VIM-201ENST00000224237 OGG1O15527 345 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 SULT1C4O75897 302 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 IL1AP01583 271 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 KRT8P05787 483 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 GAAP10253 952 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 PTGS2P35354 604 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 CCL11P51671 97 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 CARD18P57730 90 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 SLC3A1Q07837 685 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 CAMK2DQ13557 499 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 HYAL4Q2M3T9 481 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 TMEM178AQ8NBL3 297 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 OR2V1Q8NHB1 315 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 SCMH1Q96GD3 660 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 ADGRG7Q96K78 797 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 FOXN4Q96NZ1 517 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 SRXN1Q9BYN0 137 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 GALNT8Q9NY28 637 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 KCNG2Q9UJ96 466 aa16.17■□□□□ 0.18
VIM-201ENST00000224237 IGHV3-15A0A0B4J1V0 119 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 HSPB2A8KAH6 182 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 PRR32B1ATL7 298 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 H0YC42 278 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 TLX3O43711 291 aaPredicted RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 GLSO94925 669 aaPredicted RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 CD1AP06126 327 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 NR2C1P13056 603 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 ENPP1P22413 925 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 RPS27P42677 84 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 MAGEA5P43359 124 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 TGM4P49221 684 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 HSPB2Q16082 182 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 SLC18B1Q6NT16 456 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 UBQLNLQ8IYU4 475 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 MS4A15Q8N5U1 240 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 TMEM251Q8N6I4 163 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 FDCSPQ8NFU4 85 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 SLC26A10Q8NG04 563 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 THEM6Q8WUY1 208 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 ASB17Q8WXJ9 295 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms