RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 SLC9A8Q9Y2E8 581 aa6.82□□□□□ -1.32
CLK1-215ENST00000621181 LOC100130705A0A1B0GUX0 176 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 GSTA4O15217 222 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 DNPH1O43598 174 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 UGT2B17O75795 530 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 KRT33AO76009 404 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 SERPINA1P01009 418 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 CRYAAP02489 173 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 CCDC159P0C7I6 412 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 ZNF182P17025 639 aaPredicted RBP6.81□□□□□ -1.32
CLK1-215ENST00000621181 PRKACGP22612 351 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 APEX1P27695 318 aaKnown RBP6.81□□□□□ -1.32
CLK1-215ENST00000621181 MPGP29372 298 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 S100A3P33764 101 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 RANBP1P43487 201 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 GP2P55259 537 aaKnown RBP6.81□□□□□ -1.32
CLK1-215ENST00000621181 HBA1P69905 142 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 CDK5R2Q13319 367 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 TOP3AQ13472 1001 aaPredicted RBP6.81□□□□□ -1.32
CLK1-215ENST00000621181 CTF1Q16619 201 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 C1QTNF12Q5T7M4 302 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 TSPO2Q5TGU0 170 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 KDM4DQ6B0I6 523 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 VHLLQ6RSH7 139 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 SERPINA11Q86U17 422 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 PTOV1Q86YD1 416 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 EGFL6Q8IUX8 553 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 NATD1Q8N6N6 113 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 SMYD1Q8NB12 490 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 RAB2BQ8WUD1 216 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 FAM162AQ96A26 154 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 ITCHQ96J02 903 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 SIGLEC11Q96RL6 698 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
CLK1-215ENST00000621181 RAB1BQ9H0U4 201 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 DUSP21Q9H596 190 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 PALMDQ9NP74 551 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 KCNE5Q9UJ90 142 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 ENPP5Q9UJA9 477 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 SLC35A3Q9Y2D2 325 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 FLVCR1Q9Y5Y0 555 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
CLK1-215ENST00000621181 B9A039 149 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC1A7O00341 560 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 EIF1BO60739 113 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 MITFO75030 526 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 BCAS1O75363 584 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 GMNNO75496 209 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 OR4A8P0C604 315 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 GPX2P18283 190 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 CLK1P49759 484 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 CRYBA2P53672 197 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 H3F3AP84243 136 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PIGFQ07326 219 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 RFX4Q33E94 735 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ARHGAP11BQ3KRB8 267 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 HIKESHIQ53FT3 197 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ATAD3BQ5T9A4 648 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 OLIG3Q7RTU3 272 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PIWIL3Q7Z3Z3 882 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 ABHD12BQ7Z5M8 362 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 TRUB1Q8WWH5 349 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 DDIT4LQ96D03 193 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PLEKHA8Q96JA3 519 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SNX18Q96RF0 628 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 NAA11Q9BSU3 229 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 ZNF350Q9GZX5 532 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 IL1RAPQ9NPH3 570 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 EXD2Q9NVH0 621 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 TRAPPC4Q9Y296 219 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 WDR45Q9Y484 360 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 CORINQ9Y5Q5 1042 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 HSPE1-MOB4S4R3N1 261 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 hCG_2014768A0A024R1R8 64 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 IGHV1-18A0A0C4DH31 117 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SULT1C4O75897 302 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 CLPXO76031 633 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 INMTO95050 263 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 GSNP06396 782 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 DAOP14920 347 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ZNF12P17014 697 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PRPS1L1P21108 318 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 IL2RGP31785 369 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC1A3P43003 542 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 IDH2P48735 452 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 PPOXP50336 477 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 DAPP51397 102 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 IDH3GP51553 393 aaPredicted RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 CXCR4P61073 352 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 UBE2NP61088 152 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 ACTG1P63261 375 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC35A2P78381 396 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC35A1P78382 337 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 PPP1R8Q12972 351 aaKnown RBP6.8□□□□□ -1.32
CLK1-215ENST00000621181 SLC17A1Q14916 467 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 SPCS2Q15005 226 aa6.8□□□□□ -1.32
CLK1-215ENST00000621181 ADIPOQQ15848 244 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms