RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 KDM8Q8N371 416 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 RNF217Q8TC41 542 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 GEMIN6Q8WXD5 167 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 POP5Q969H6 163 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 ZNF837Q96EG3 531 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 PYURFQ96I23 114 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 MCHR1Q99705 422 aa14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 RSPO3Q9BXY4 272 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-215ENST00000597649 A0A0A6YYJ9 748 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 IGHV2OR16-5A0A0B4J2B6 119 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 RGS9O75916 674 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 IFNW1P05000 195 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 TNFRSF1BP20333 461 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 ATP6V1B2P21281 511 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 PAX7P23759 505 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 CXCR1P25024 350 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 IFNA8P32881 189 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 OR1E2P47887 323 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 COMPP49747 757 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 ARF1P84077 181 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 ROR2Q01974 943 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 LCN8Q6JVE9 175 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 OR6T1Q8NGN1 323 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 ZFAND2BQ8WV99 257 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 RAB3IPQ96QF0 476 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 TPK1Q9H3S4 243 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 SLC7A8Q9UHI5 535 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 POMPQ9Y244 141 aa14.18□□□□□ -0.14
SHKBP1-215ENST00000597649 OR6C65A6NJZ3 312 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 B4DSR2 109 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 FAM157AC9JC47 383 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 ACOT8O14734 319 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 WNT9BO14905 357 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 FMO6PO60774 539 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 NPIPB7O75200 414 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 ZNF432O94892 652 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 COL8A2P25067 703 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 OR1Q1Q15612 314 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 ELFN2Q5R3F8 820 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 C1orf146Q5VVC0 180 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 SPATA24Q86W54 205 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 RBM45Q8IUH3 476 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 LINC00470Q9BZP3 86 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 RACGAP1Q9H0H5 632 aa14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 FBXO9Q9UK97 447 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 FAM32AQ9Y421 112 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-215ENST00000597649 TMEM89A2RUT3 159 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 ERICH4A6NGS2 130 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 AQP12BA6NM10 295 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 CPSF4LA6NMK7 179 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 A8MVM7 634 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 RPL36A-HNRNPH2H7BZ11 118 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 VAMP5O95183 116 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 ERCC1P07992 297 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 TAS2R41P59536 307 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 IL1RL1Q01638 556 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 FAM98BQ52LJ0 330 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 ENTPD8Q5MY95 495 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 C1orf140Q5VVS0 124 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 CYP4Z1Q86W10 505 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 AQP12AQ8IXF9 295 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 LSMEM1Q8N8F7 131 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 OR4D11Q8NGI4 311 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 CLDND2Q8NHS1 167 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 DNAJA4Q8WW22 397 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 SLC47A1Q96FL8 570 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 SEPHS2Q99611 448 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 WFDC6Q9BQY6 131 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 LPAR2Q9HBW0 351 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 DYNLRB1Q9NP97 96 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 HIF1ANQ9NWT6 349 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 SPEF1Q9Y4P9 236 aa14.16□□□□□ -0.14
SHKBP1-215ENST00000597649 A0A1B0GWA3 101 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 VSTM5A8MXK1 200 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 FTCDNL1E5RQL4 147 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 HPXP02790 462 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 HTR2AP28223 471 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 DAG1Q14118 895 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 NPTX1Q15818 432 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 ALG10BQ5I7T1 473 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 KRT80Q6KB66 452 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 ULK3Q6PHR2 472 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 UGT2A3Q6UWM9 527 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 C1orf229Q6ZS94 237 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 MDP1Q86V88 176 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 GLCCI1Q86VQ1 547 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 FAM86B1Q8N7N1 296 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 RSRC1Q96IZ7 334 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 TAPBPLQ9BX59 468 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 MRPL37Q9BZE1 423 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 POLR2J2Q9GZM3 115 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 POLR2J3Q9H1A7 115 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 NARFLQ9H6Q4 476 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 NOX3Q9HBY0 568 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 GPR35Q9HC97 309 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 SEC14L4Q9UDX3 406 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 RASD1Q9Y272 281 aa14.15□□□□□ -0.14
SHKBP1-215ENST00000597649 TCRBV5S2A0A599 114 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms