RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SYT14Q8NB59 555 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 SLC7A13Q8TCU3 470 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 MCHR2Q969V1 340 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 TXNIPQ9H3M7 391 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 ANKRD19PQ9H560 264 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 CA10Q9NS85 328 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 TMEM38BQ9NVV0 291 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 RTTNQ86VV8 2226 aa16.03■□□□□ 0.16
SHKBP1-202ENST00000593764 CENPBD1B2RD01 187 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 MCIDASD6RGH6 385 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 H7C417 338 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 CDC42EP2O14613 210 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 SMAD7O15105 426 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 PATE4P0C8F1 98 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF14P17017 642 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 DAP3P51398 398 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF133P52736 654 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 CLRN1P58418 232 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 VLDLRP98155 873 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 MYBPC1Q00872 1141 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 KRT72Q14CN4 511 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 ADIPOQQ15848 244 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 ALG10Q5BKT4 473 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 SAMD4BQ5PRF9 694 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 ZNF730Q6ZMV8 503 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 SLC22A24Q8N4F4 322 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 NOXO1Q8NFA2 376 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 NUP37Q8NFH4 326 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 OR4F15Q8NGB8 312 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 HTRA1Q92743 480 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 HDAC2Q92769 488 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 NMD3Q96D46 503 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 MS4A3Q96HJ5 214 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 TNFRSF13CQ96RJ3 184 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 DENND2DQ9H6A0 471 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 FAM53CQ9NYF3 392 aa16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 SAMD4AQ9UPU9 718 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-202ENST00000593764 TRAV27A0A087WT01 109 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 A0A1W2PRQ8 180 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 GMNNO75496 209 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 LY6G6DO95868 133 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 FAM107AO95990 144 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 SEMG1P04279 462 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 SAGP10523 405 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 RHCEP18577 417 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 SERPINF1P36955 418 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 GIPRP48546 466 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 RAB1AP62820 205 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 DGCR6Q14129 220 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 PODNL1Q6PEZ8 512 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 TMPRSS11FQ6ZWK6 438 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 OAFQ86UD1 273 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 CYP4Z1Q86W10 505 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 DEFB107AQ8IZN7 70 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 IL17RDQ8NFM7 739 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 OR51A7Q8NH64 312 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 FBXO17Q96EF6 278 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 PYURFQ96I23 114 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 KCNK17Q96T54 332 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 SH3GL3Q99963 347 aa16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 BARX1Q9HBU1 254 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-202ENST00000593764 IGKV1D-43A0A0B4J1Z2 117 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 EFCAB9A8MZ26 197 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 hCG_2039718K7EN88 272 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 DIRAS1O95057 198 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 IGHMP01871 453 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 H1F0P07305 194 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 OR4A8P0C604 315 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 OR8G3PP0DMU2 310 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF35P13682 527 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF26P17031 533 aaPredicted RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 GPR4P46093 362 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 PTDSS1P48651 473 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 CTXN1P60606 82 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 RPL27P61353 136 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 CHRNB3Q05901 458 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 RAB35Q15286 201 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 TAF11Q15544 211 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 ANKDD1AQ495B1 522 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 C10orf128Q5T292 105 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 VHLLQ6RSH7 139 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 C16orf89Q6UX73 402 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 CLEC9AQ6UXN8 241 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 Q71RC1 249 aaPredicted RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 HDDC2Q7Z4H3 204 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 IGFN1Q86VF2 1251 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 OR13C2Q8NGS9 318 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 NANOS1Q8WY41 292 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 DHRS1Q96LJ7 313 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 FUZQ9BT04 418 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 STX18Q9P2W9 335 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 MAGEL2Q9UJ55 1249 aa16■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF346Q9UL40 294 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 FAM32AQ9Y421 112 aaKnown RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 NSD1Q96L73 2696 aaPredicted RBP16■□□□□ 0.15
SHKBP1-202ENST00000593764 ARPC2O15144 300 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 SSX4O60224 188 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 PDE5AO76074 875 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 UBL3O95164 117 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 SLC2A10O95528 541 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms