RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CLHC1Q8NHS4 586 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SGMS2Q8NHU3 365 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ZNF418Q8TF45 676 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 CORO2AQ92828 525 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 TUBGCP3Q96CW5 907 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 OTUB1Q96FW1 271 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 PPP3R2Q96LZ3 170 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ANKRD27Q96NW4 1050 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 RAB3IPQ96QF0 476 aaPredicted RBP4.84□□□□□ -1.63
DNMT1-220ENST00000589351 OR7D2Q96RA2 312 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 ANKZF1Q9H8Y5 726 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SLC35D1Q9NTN3 355 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 TMEM45AQ9NWC5 275 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 TMEM181Q9P2C4 612 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 MALT1Q9UDY8 824 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 CHRNA9Q9UGM1 479 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 PRDM4Q9UKN5 801 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 MOKQ9UQ07 419 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 SLC35A3Q9Y2D2 325 aa4.84□□□□□ -1.63
DNMT1-220ENST00000589351 FREM1Q5H8C1 2179 aa4.84□□□□□ -1.64
DNMT1-220ENST00000589351 ALPK2Q86TB3 2170 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 PRSS29PA6NIE9 313 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 NPIPB9F8W1W9 429 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 COPEO14579 308 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 MAGEB3O15480 346 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 E2F6O75461 281 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 H6PDO95479 791 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 GPIP06744 558 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 FGF4P08620 206 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SPARCP09486 303 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 UBTFL6P0CB48 400 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 BCKDHAP12694 445 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 DAOP14920 347 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CDH2P19022 906 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CXCR1P25024 350 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 RYKP34925 604 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CRHR1P34998 444 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SOAT1P35610 550 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ANXA11P50995 505 aaKnown RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 UBE2NP61088 152 aaKnown RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 HPCAP84074 193 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 FOXL1Q12952 345 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SKP2Q13309 424 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 GNA13Q14344 377 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 RAB39AQ14964 217 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 NDUFAF6Q330K2 333 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ARHGAP11BQ3KRB8 267 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 FAM153CQ494X1 144 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ATP6AP1LQ52LC2 224 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 C9orf135Q5VTT2 229 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 LIPMQ5VYY2 423 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 FAM219BQ5XKK7 198 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 TMEM225Q6GV28 225 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ABLIM2Q6H8Q1 611 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 B3GLCTQ6Y288 498 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 AAED1Q7RTV5 226 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 GRINAQ7Z429 371 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 C6orf120Q7Z4R8 191 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SPATA19Q7Z5L4 167 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 MEX3DQ86XN8 651 aaKnown RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 IFT20Q8IY31 132 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ARFGAP2Q8N6H7 521 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 C3orf56Q8N813 242 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 WDR31Q8NA23 367 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 POC5Q8NA72 575 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 OR7A2PQ8NGA2 310 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 OR52E4Q8NGH9 312 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 PSMA8Q8TAA3 256 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 GCDHQ92947 438 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 COQ8BQ96D53 544 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 FCRL1Q96LA6 429 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF317Q96PQ6 595 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 DUSP26Q9BV47 211 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 KATNB1Q9BVA0 655 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CCDC106Q9BWC9 280 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 SF3B5Q9BWJ5 86 aaKnown RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 TAPBPLQ9BX59 468 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 PLA2G12AQ9BZM1 189 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 POLE3Q9NRF9 147 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 CA10Q9NS85 328 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 MKLN1Q9UL63 735 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 WDR45Q9Y484 360 aa4.83□□□□□ -1.64
DNMT1-220ENST00000589351 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
DNMT1-220ENST00000589351 PRR14LQ5THK1 2151 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 IGHV4-61A0A0C4DH41 118 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 B4DSR2 109 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF587BE7ETH6 402 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 ATP6V1G2-DDX39BF2Z307 99 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 TRIM77I1YAP6 450 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 KLF11O14901 512 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 LSM1O15116 133 aaKnown RBP4.82□□□□□ -1.64
DNMT1-220ENST00000589351 ZNF208O43345 1280 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 PLIN3O60664 434 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 UGT2B17O75795 530 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 LY6HO94772 140 aa4.82□□□□□ -1.64
DNMT1-220ENST00000589351 VAMP5O95183 116 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms