RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 ABRACLQ9P1F3 81 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ING1Q9UK53 422 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 AK6Q9Y3D8 172 aaKnown RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 A0A087WV48 116 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 NPIPB13A6NJU9 1138 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 LIPT2A6NK58 231 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 NPIPB4C9JG80 1138 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 H3BML4 177 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF593O00488 134 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 EFNA2O43921 213 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CELA2AP08217 269 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CRABP1P29762 137 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 DAP3P51398 398 aaKnown RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 TLE3Q04726 772 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 DBX2Q6ZNG2 339 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 OR2M3Q8NG83 312 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 POC1BQ8TC44 478 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CHAC2Q8WUX2 184 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 ASB10Q8WXI3 467 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 FOXN4Q96NZ1 517 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 AMELYQ99218 206 aa16.3■□□□□ 0.2
SMPD3-211ENST00000568373 MRPL22Q9NWU5 206 aaKnown RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 CHCHD2Q9Y6H1 151 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-211ENST00000568373 B4E171 279 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 NPIPA5E9PKD4 350 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 TSPAN7P41732 249 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 OR2B6P58173 313 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
SMPD3-211ENST00000568373 ETFDHQ16134 617 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 OR2G2Q8NGZ5 317 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 ASB17Q8WXJ9 295 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 NSMAFQ92636 917 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 KCNJ15Q99712 375 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 CMKLR1Q99788 373 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 ARRDC1-AS1Q9H2J1 176 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 SACM1LQ9NTJ5 587 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 ALKBH4Q9NXW9 302 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 SLCO1C1Q9NYB5 712 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 TEKT2Q9UIF3 430 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 FBXL2Q9UKC9 423 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 NPIPA1Q9UND3 350 aa16.29■□□□□ 0.2
SMPD3-211ENST00000568373 TP53I11O14683 189 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SP9P0CG40 484 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 IFNGR1P15260 489 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 GLO1Q04760 184 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 ZNF528Q3MIS6 628 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 Q499Y3 187 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 OTPQ5XKR4 325 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SLC18B1Q6NT16 456 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 AKAP14Q86UN6 197 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 RAB43Q86YS6 212 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 OR5H6Q8NGV6 325 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 M1APQ8TC57 530 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 RHBDD1Q8TEB9 315 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 OR8B4Q96RC9 309 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SERINC1Q9NRX5 453 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 B3GALT5Q9Y2C3 310 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 FREM3P0C091 2139 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 COL27A1Q8IZC6 1860 aaPredicted RBP16.28■□□□□ 0.2
SMPD3-211ENST00000568373 ANKRD61A6NGH8 418 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 OR4C45A6NMZ5 311 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 FZD7O75084 574 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SPARCP09486 303 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SNRPBP14678 240 aaKnown RBP16.28■□□□□ 0.2
SMPD3-211ENST00000568373 MAGEB1P43366 347 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 PITPNBP48739 271 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 EIF2B2P49770 351 aaKnown RBP16.28■□□□□ 0.2
SMPD3-211ENST00000568373 TPTEP56180 551 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 HSF1Q00613 529 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 POU3F1Q03052 451 aaPredicted RBP16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SNTA1Q13424 505 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 AGAP6Q5VW22 663 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 SLC35D2Q76EJ3 337 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 UBQLNLQ8IYU4 475 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 FADS6Q8N9I5 356 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 WDSUB1Q8N9V3 476 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 ORAI1Q96D31 301 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 C5orf34Q96MH7 638 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 AGAP4Q96P64 663 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 BRD7Q9NPI1 651 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 FANCFQ9NPI8 374 aa16.28■□□□□ 0.2
SMPD3-211ENST00000568373 A0A0B4J203 849 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 TRBV5-5A0A0J9YX44 114 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 A0A1B0GTH9 108 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 TMEM212A6NML5 194 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 CENPBD1B2RD01 187 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 PDCD5O14737 125 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 MAPK3P27361 379 aaPredicted RBP16.27■□□□□ 0.2
SMPD3-211ENST00000568373 ADAM8P78325 824 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 MYBPHQ13203 477 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 MEP1BQ16820 701 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 FAM205BPQ63HN1 556 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 C3orf33Q6P1S2 294 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.27■□□□□ 0.2
SMPD3-211ENST00000568373 RDH10Q8IZV5 341 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 FRMD6Q96NE9 622 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 SLC25A18Q9H1K4 315 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 MMP28Q9H239 520 aa16.27■□□□□ 0.2
SMPD3-211ENST00000568373 NPAP1Q9NZP6 1156 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms