RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 ZNRF4Q8WWF5 429 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 HAS2Q92819 552 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 RELTQ969Z4 430 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 TSSK2Q96PF2 358 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 CENPOQ9BU64 300 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 RERGLQ9H628 205 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 WDR76Q9H967 626 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 ISG20L2Q9H9L3 353 aaKnown RBP12.34□□□□□ -0.43
TPM1-215ENST00000558868 TIGARQ9NQ88 270 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 QPCTLQ9NXS2 382 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 PLA2G3Q9NZ20 509 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 CCDC59Q9P031 241 aaKnown RBP12.34□□□□□ -0.43
TPM1-215ENST00000558868 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 DOCK10Q96BY6 2186 aa12.34□□□□□ -0.43
TPM1-215ENST00000558868 IGLV1-36A0A0B4J1U3 117 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 TRDV1A0A1B0GX56 115 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 A6NL46 340 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 HSPB2A8KAH6 182 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 FAM171A2A8MVW0 826 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 NKX2-8O15522 239 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 F10P00742 488 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 IGHG1P01857 330 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 HLA-DQA2P01906 255 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 HPNP05981 417 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CD1AP06126 327 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 GAAP10253 952 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 PRKAR1AP10644 381 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 BIDP55957 195 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 RAC3P60763 192 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 RPS3AP61247 264 aaKnown RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 ARG2P78540 354 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 H3F3AP84243 136 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ROR2Q01974 943 aaKnown RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 PLGLB1Q02325 96 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CDC20Q12834 499 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CLN3Q13286 438 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 DOC2BQ14184 412 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 POU4F3Q15319 338 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 HSPB2Q16082 182 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 MOGQ16653 247 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CCDC58Q4VC31 144 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ATP1A1-AS1Q5TC04 95 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 FAM220AQ7Z4H9 259 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 LURAP1LQ8IV03 231 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ZNF511Q8NB15 262 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 TMEM178AQ8NBL3 297 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 OR6X1Q8NH79 312 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 ASB17Q8WXJ9 295 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 SLC25A44Q96H78 314 aaPredicted RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 TIMP4Q99727 224 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.33□□□□□ -0.44
TPM1-215ENST00000558868 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 LAMP5Q9UJQ1 280 aa12.33□□□□□ -0.44
TPM1-215ENST00000558868 SF3B6Q9Y3B4 125 aaKnown RBP12.33□□□□□ -0.44
TPM1-215ENST00000558868 PINLYPA6NC86 204 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 TRABD2BA6NFA1 517 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 DCTN6O00399 190 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 PLPP2O43688 288 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 SULT1C4O75897 302 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 LALBAP00709 142 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 SERPINA3P01011 423 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 RFPL3SP0C7P2 107 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 POU3F2P20265 443 aaPredicted RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 OR12D2P58182 307 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 CLRN1P58418 232 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 RPS25P62851 125 aaKnown RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 EGR3Q06889 387 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 HYAL4Q2M3T9 481 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 WIPI1Q5MNZ9 446 aaPredicted RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 RPL22L1Q6P5R6 122 aaKnown RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 NHLRC1Q6VVB1 395 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 GPAT4Q86UL3 456 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 OR6N2Q8NGY6 317 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 TBC1D15Q8TC07 691 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 TXNDC15Q96J42 360 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 KCTD7Q96MP8 289 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 DACH2Q96NX9 599 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 SF3B5Q9BWJ5 86 aaKnown RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 KCNN2Q9H2S1 579 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 MMP27Q9H306 513 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 ZNF703Q9H7S9 590 aaPredicted RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 TXNL4BQ9NX01 149 aaKnown RBP12.32□□□□□ -0.44
TPM1-215ENST00000558868 MED29Q9NX70 200 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 KLHL9Q9P2J3 617 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 GNG8Q9UK08 70 aa12.32□□□□□ -0.44
TPM1-215ENST00000558868 A0A0J9YW62 118 aa12.31□□□□□ -0.44
TPM1-215ENST00000558868 PNMA8CA0A1B0GUJ8 204 aa12.31□□□□□ -0.44
TPM1-215ENST00000558868 TVP23AA6NH52 213 aa12.31□□□□□ -0.44
TPM1-215ENST00000558868 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms