RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PPP4R1LQ9P1A2 415 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 KLHL9Q9P2J3 617 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 CHD8Q9HCK8 2581 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 A0A1W2PPK0 400 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 UBE2QL1A1L167 161 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 HMSDA8MTL9 139 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 MPTX1A8MV57 137 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 LINC01565O15544 149 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 HSPA12AO43301 675 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PRAMEF2O60811 474 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ARL6IP5O75915 188 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 AQP8O94778 261 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR2A4O95047 310 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 P04436 131 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ATP1B1P05026 303 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ITGA5P08648 1049 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 MRPL3P09001 348 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 CISD3P0C7P0 127 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 EPXP11678 715 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TIMP2P16035 220 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ACHEP22303 614 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 SELENOVP59797 346 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ARG2P78540 354 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 S100A12P80511 92 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PLA2G7Q13093 441 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 CBFBQ13951 182 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 C2orf68Q2NKX9 166 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 C9orf135Q5VTT2 229 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 LIN54Q6MZP7 749 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 APOOLQ6UXV4 268 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TMEM64Q6YI46 380 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ZNF765Q7L2R6 523 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 MCATQ8IVS2 390 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 SFTPA1Q8IWL2 248 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ZNF100Q8IYN0 542 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 C17orf47Q8NEP4 570 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 NUP43Q8NFH3 380 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR52B4Q8NGK2 314 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR13C5Q8NGS8 318 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR14L1PQ8NHC6 308 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 STK35Q8TDR2 534 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR2A7Q96R45 310 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ARHGDIGQ99819 225 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 SLC39A1Q9NY26 324 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TAS2R5Q9NYW4 299 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 CXorf65A6NEN9 183 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 SNRPGP15A8MWD9 76 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 GABARAPH6UMI1 98 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 WRBO00258 174 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PRICKLE3O43900 615 aaPredicted RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 SC5DO75845 299 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 SYNGR4O95473 234 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 IL5P05113 134 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ANXA2P07355 339 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 NR2C1P13056 603 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PGAM2P15259 253 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ANXA7P20073 488 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 BSGP35613 385 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TSPAN7P41732 249 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 POU3F4P49335 361 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 DLX5P56178 289 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PLP2Q04941 152 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 FUT5Q11128 374 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 MLF2Q15773 248 aaPredicted RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 ZNF425Q6IV72 752 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 SERPINA12Q8IW75 414 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 CMTM4Q8IZR5 234 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PXT1Q8NFP0 134 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR5M9Q8NGP3 310 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 OR52I2Q8NH67 350 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 BRIX1Q8TDN6 353 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 CPNE2Q96FN4 548 aaPredicted RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 PGLYRP3Q96LB9 341 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TIMP4Q99727 224 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 MS4A8Q9BY19 250 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 UBQLN3Q9H347 655 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 GLIPR2Q9H4G4 154 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 TCF7L1Q9HCS4 588 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 NDRG3Q9UGV2 375 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 PURGQ9UJV8 347 aaKnown RBP4.79□□□□□ -1.64
PROM1-220ENST00000540805 FBXL3Q9UKT7 428 aa4.79□□□□□ -1.64
PROM1-220ENST00000540805 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TSPAN11A1L157 253 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CDHR4A6H8M9 788 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NPIPA7E9PJI5 369 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZNF749O43361 778 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 HPP00738 406 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NPIPA8P0DM63 369 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MYF5P13349 255 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 GRPRP30550 384 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MAP3K8P41279 467 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CDK3Q00526 305 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 DMWDQ09019 674 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 RASGEF1BQ0VAM2 473 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms