RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OR8D4Q8NGM9 314 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 NMD3Q96D46 503 aaKnown RBP11.22□□□□□ -0.61
VEGFA-224ENST00000523873 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 DUS3LQ96G46 650 aaKnown RBP11.22□□□□□ -0.61
VEGFA-224ENST00000523873 GPX7Q96SL4 187 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-224ENST00000523873 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 FOXB1Q99853 325 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 PLA2G12AQ9BZM1 189 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 CLEC4MQ9H2X3 399 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-224ENST00000523873 YY1AP1Q9H869 796 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 NRIP3Q9NQ35 241 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 ASH1LQ9NR48 2969 aaKnown RBP11.22□□□□□ -0.61
VEGFA-224ENST00000523873 GRHPRQ9UBQ7 328 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 DNAJB9Q9UBS3 223 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 AP4S1Q9Y587 144 aa11.22□□□□□ -0.61
VEGFA-224ENST00000523873 AKAP6Q13023 2319 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 TP53P04637 393 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 HOXC12P31275 282 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 SLC6A6P31641 620 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 CAPZA2P47755 286 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 SH3BGRP55822 239 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 ACTR3P61158 418 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 GABPB1Q06547 395 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 KRR1Q13601 381 aaKnown RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 TAF11Q15544 211 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 ATP6AP1Q15904 470 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 HIST3H3Q16695 136 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 BEX5Q5H9J7 111 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 DPY19L2P2Q6ZN68 376 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 PTCHD4Q6ZW05 846 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 HDDC2Q7Z4H3 204 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 P2RY8Q86VZ1 359 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 LINC00471Q8N535 108 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 LRTOMTQ8WZ04 291 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 LURAP1Q96LR2 239 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 FOXN4Q96NZ1 517 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 ERMAPQ96PL5 475 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 FEVQ99581 238 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 IFT27Q9BW83 186 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 NDEL1Q9GZM8 345 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 LIME1Q9H400 295 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 DENND2DQ9H6A0 471 aaPredicted RBP11.21□□□□□ -0.61
VEGFA-224ENST00000523873 SEC61A2Q9H9S3 476 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 NOX3Q9HBY0 568 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 ARMC1Q9NVT9 282 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 AMDHD2Q9Y303 409 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 CDH10Q9Y6N8 788 aa11.21□□□□□ -0.61
VEGFA-224ENST00000523873 RTTNQ86VV8 2226 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 A6NIZ1 184 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 DEAF1O75398 565 aaPredicted RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 CELA3BP08861 270 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 PATE4P0C8F1 98 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 HOXB6P17509 224 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 SDHAP31040 664 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 CDAP32320 146 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 CDKN2AP42771 156 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 UBE2NP61088 152 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 RAP1BP61224 184 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 RAP1AP62834 184 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 BSPH1Q075Z2 132 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 ETFDHQ16134 617 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 NCMAPQ5T1S8 102 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 OTPQ5XKR4 325 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 KLHL17Q6TDP4 642 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 OR4Q3Q8NH05 313 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 FGFBP3Q8TAT2 258 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 NEUROG1Q92886 237 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 SH3GL3Q99963 347 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 ALG12Q9BV10 488 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 SEMA6AQ9H2E6 1030 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 FN3KQ9H479 309 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 TBC1D23Q9NUY8 699 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 TMEM38BQ9NVV0 291 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 ZNF224Q9NZL3 707 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 STX18Q9P2W9 335 aaKnown RBP11.2□□□□□ -0.62
VEGFA-224ENST00000523873 MGAT4BQ9UQ53 548 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 UGT2A1Q9Y4X1 527 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 CRYBG3Q68DQ2 2970 aa11.2□□□□□ -0.62
VEGFA-224ENST00000523873 ROS1P08922 2347 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 ARPC4-TTLL3A0A0A6YYG9 625 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 SLC22A23A1A5C7 686 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 CENPBD1B2RD01 187 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 H3BNX3 289 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 XKRYO14609 159 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 TXNDC12O95881 172 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 HLA-HP01893 362 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 CD79AP11912 226 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 HIST1H1CP16403 213 aaKnown RBP11.19□□□□□ -0.62
VEGFA-224ENST00000523873 FASP25445 335 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 ZNF84P51523 738 aa11.19□□□□□ -0.62
VEGFA-224ENST00000523873 RPS6KA3P51812 740 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms