RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MRAPQ8TCY5 172 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 RXFP2Q8WXD0 754 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 OSTF1Q92882 214 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 SDSLQ96GA7 329 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 DUX3Q96PT4 197 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TNFRSF13CQ96RJ3 184 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM173AQ9BQD7 235 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TRIM51Q9BSJ1 452 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TIPINQ9BVW5 301 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 TM6SF2Q9BZW4 377 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 COMMD4Q9H0A8 199 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 WDR41Q9HAD4 459 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 DEPPQ9NTK1 212 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 GPATCH2LQ9NWQ4 482 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 MRPL39Q9NYK5 338 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 CRLS1Q9UJA2 301 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF346Q9UL40 294 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 MGAT4AQ9UM21 535 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 HS3ST2Q9Y278 367 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 GSTK1Q9Y2Q3 226 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 EXOSC1Q9Y3B2 195 aaKnown RBP3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 ALG6Q9Y672 507 aa3.86□□□□□ -1.79
HMGB1P23-201ENST00000518743 IGHV3-20A0A0C4DH32 117 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 IGHV5-51A0A0C4DH38 117 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 XKRY2A2RUG3 117 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CTAGE15A4D2H0 777 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF724A8MTY0 619 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 E7ENQ6 273 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF208O43345 1280 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 B4GALT2O60909 372 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 SNNO75324 88 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 WBP4O75554 376 aaKnown RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 STX11O75558 287 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CIB2O75838 187 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 KLF7O75840 302 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 IGLV1-44P01699 117 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 FCGR3AP08637 254 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ANXA3P12429 323 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 HSD17B1P14061 328 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CD1DP15813 335 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 NT5EP21589 574 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 RORAP35398 523 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 SAA4P35542 130 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ID1P41134 155 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 PLK1P53350 603 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 GSCP56915 257 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 TNFRSF17Q02223 184 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 FGL1Q08830 312 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 PJVKQ0ZLH3 352 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ATXN7L3Q14CW9 347 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CD226Q15762 336 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 TMEM249Q2WGJ8 235 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 UNC50Q53HI1 259 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CARD16Q5EG05 197 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM182AQ5T1J6 154 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 NLRP9Q7RTR0 991 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 NUFIP2Q7Z417 695 aaKnown RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CTAGE6Q86UF2 777 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 NECAB1Q8N987 351 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR1B1Q8NGR6 318 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR2Y1Q8NGV0 311 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF519Q8TB69 540 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 HCAR2Q8TDS4 363 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 IL1F10Q8WWZ1 152 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 RNASE6Q93091 150 aaKnown RBP3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 FBXO17Q96EF6 278 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 RCHY1Q96PM5 261 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR2M4Q96R27 311 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 CALHM2Q9HA72 323 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 POPDC2Q9HBU9 364 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 SENP1Q9P0U3 644 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 PIPOXQ9P0Z9 390 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 KLHL21Q9UJP4 597 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 LRP12Q9Y561 859 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 AUP1Q9Y679 476 aa3.85□□□□□ -1.79
HMGB1P23-201ENST00000518743 PLCE1Q9P212 2302 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CPAMD8Q8IZJ3 1885 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 MPTX1A8MV57 137 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 C11orf98E9PRG8 122 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 H3BMH7 237 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 IMPA2O14732 288 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ARPC3O15145 178 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR1F1O43749 312 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 LCA5LO95447 670 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 JCHAINP01591 159 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 APOEP02649 317 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 H2AFZP0C0S5 128 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 TBXA2RP21731 343 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCNCP24863 283 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 OPRL1P41146 370 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 GRIA1P42261 906 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 CAPZBP47756 277 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 AP3M2P53677 418 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 PLA2G16P53816 162 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 SLC8A3P57103 927 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ACTR3P61158 418 aa3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 RPS27AP62979 156 aaKnown RBP3.84□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF33BQ06732 778 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms