RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 RAB39AQ14964 217 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 CR1LQ2VPA4 569 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 TTC33Q6PID6 262 aaPredicted RBP9.39□□□□□ -0.91
RNF4-212ENST00000509258 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 TREML1Q86YW5 311 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 RFLNBQ8N5W9 214 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 OR8J3Q8NGG0 315 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 OR6N1Q8NGY5 312 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 OR6X1Q8NH79 312 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 HPS1Q92902 700 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 RCN3Q96D15 328 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 ZNF347Q96SE7 839 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 FOXB1Q99853 325 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 SH3GL3Q99963 347 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 MRPL37Q9BZE1 423 aaKnown RBP9.39□□□□□ -0.91
RNF4-212ENST00000509258 DENND2DQ9H6A0 471 aaPredicted RBP9.39□□□□□ -0.91
RNF4-212ENST00000509258 FBXL3Q9UKT7 428 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 CMAHPQ9Y471 501 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 TANC2Q9HCD6 1990 aa9.39□□□□□ -0.91
RNF4-212ENST00000509258 SH3PXD2BA1X283 911 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 ZNF726A6NNF4 738 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 RNF13O43567 381 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 TCF21O43680 179 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 F13BP05160 661 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 TSPAN19P0C672 248 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 CCL2P13500 99 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 NR4A1P22736 598 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 GIFP27352 417 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 AQP2P41181 271 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 PTDSS1P48651 473 aaKnown RBP9.38□□□□□ -0.91
RNF4-212ENST00000509258 GALK2Q01415 458 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 FHL1Q13642 323 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 CYLC2Q14093 348 aaPredicted RBP9.38□□□□□ -0.91
RNF4-212ENST00000509258 DAG1Q14118 895 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 GSG1Q2KHT4 349 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 CYBRD1Q53TN4 286 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 COQ5Q5HYK3 327 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 VTCN1Q7Z7D3 282 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 SLC30A8Q8IWU4 369 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 LINC01356Q8N9X3 169 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 NMD3Q96D46 503 aaKnown RBP9.38□□□□□ -0.91
RNF4-212ENST00000509258 ECSITQ9BQ95 431 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 TPK1Q9H3S4 243 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 NANSQ9NR45 359 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 MAN2C1Q9NTJ4 1040 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 GLTPQ9NZD2 209 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 RIMS3Q9UJD0 308 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 ZNF229Q9UJW7 825 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 FZR1Q9UM11 496 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 A4GNTQ9UNA3 340 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 POFUT2Q9Y2G5 429 aa9.38□□□□□ -0.91
RNF4-212ENST00000509258 LRP5LA4QPB2 252 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 FAM220BPB1ANY3 271 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 BLOC1S5-TXNDC5H3BN57 136 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 J3KTA2 159 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 M0R233 179 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 NME4O00746 187 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 FFAR1O14842 300 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 OR7A10O76100 309 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 RAB36O95755 333 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 MT-ND1P03886 318 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 QDPRP09417 244 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 TACSTD2P09758 323 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 TROVE2P10155 538 aaKnown RBP eCLIP9.37□□□□□ -0.91
RNF4-212ENST00000509258 UMPSP11172 480 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 APEX1P27695 318 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 YAP1P46937 504 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 EVX1P49640 407 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 SEC24CP53992 1094 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 TAS2R41P59536 307 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 ERVS71-1P61550 626 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 RAB1AP62820 205 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 FMODQ06828 376 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 MAD2L1BPQ15013 274 aaPredicted RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 TRIP10Q15642 601 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 FXNQ16595 210 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 HIST3H3Q16695 136 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 MMEL1Q495T6 779 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 LRRC23Q53EV4 343 aaPredicted RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 TMEM255AQ5JRV8 349 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 INTS11Q5TA45 600 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 GKAP1Q5VSY0 366 aaPredicted RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 TSEN54Q7Z6J9 526 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 SLC15A3Q8IY34 581 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 CLDN22Q8N7P3 220 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 SYT14Q8NB59 555 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 RBM15BQ8NDT2 890 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 ASB10Q8WXI3 467 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 SLC25A44Q96H78 314 aaPredicted RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 MPP4Q96JB8 637 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 SEPHS2Q99611 448 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 SYT3Q9BQG1 590 aa9.37□□□□□ -0.91
RNF4-212ENST00000509258 MRPL13Q9BYD1 178 aaKnown RBP9.37□□□□□ -0.91
RNF4-212ENST00000509258 CCDC134Q9H6E4 229 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms