RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FAM122BQ7Z309 247 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 WDFY1Q8IWB7 410 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 SYT14Q8NB59 555 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 OR10G2Q8NGC3 310 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 OR9Q2Q8NGE9 314 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 HDAC2Q92769 488 aaKnown RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 ZNF837Q96EG3 531 aaPredicted RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 DUS3LQ96G46 650 aaKnown RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 RADILQ96JH8 1075 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 GPA33Q99795 319 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 ARMC1Q9NVT9 282 aa13.13□□□□□ -0.31
RNF4-210ENST00000508235 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
RNF4-210ENST00000508235 IMPA2O14732 288 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 ARHGEF9O43307 516 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 IDH3BO43837 385 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 GASTP01350 101 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 OR8G3PP0DMU2 310 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 FCGR1AP12314 374 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 ZNF26P17031 533 aaPredicted RBP13.12□□□□□ -0.31
RNF4-210ENST00000508235 GUCA1AP43080 201 aaPredicted RBP13.12□□□□□ -0.31
RNF4-210ENST00000508235 ZNF83P51522 516 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 COX10Q12887 443 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 PPP1R8Q12972 351 aaKnown RBP13.12□□□□□ -0.31
RNF4-210ENST00000508235 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
RNF4-210ENST00000508235 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 C10orf128Q5T292 105 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 ZNF620Q6ZNG0 422 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 DPPA2Q7Z7J5 298 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 ADCK1Q86TW2 530 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 SLCO4A1Q96BD0 722 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 DGCR6LQ9BY27 220 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 NELFAQ9H3P2 528 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
RNF4-210ENST00000508235 TMEM38BQ9NVV0 291 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 VNN3Q9NY84 501 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 AP4S1Q9Y587 144 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
RNF4-210ENST00000508235 M0R1B8 84 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 ARPC3O15145 178 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 TIPRLO75663 272 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 TXNDC12O95881 172 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 B4GALT1P15291 398 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 NPR2P20594 1047 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
RNF4-210ENST00000508235 NOS3P29474 1203 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 ARR3P36575 388 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 CAPZA2P47755 286 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 KRTAP10-9P60411 292 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 MYBPC1Q00872 1141 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 BSPH1Q075Z2 132 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 CCNIQ14094 377 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 THSD4Q6ZMP0 1018 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 ZNF704Q6ZNC4 412 aaPredicted RBP13.11□□□□□ -0.31
RNF4-210ENST00000508235 SLC22A24Q8N4F4 322 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 Q96M85 177 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
RNF4-210ENST00000508235 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 TMEM204Q9BSN7 226 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 BDH2Q9BUT1 245 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 PLEKHF2Q9H8W4 249 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 NPAP1Q9NZP6 1156 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 PDP1Q9P0J1 537 aaPredicted RBP13.11□□□□□ -0.31
RNF4-210ENST00000508235 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 FBXL3Q9UKT7 428 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
RNF4-210ENST00000508235 TEX13CA0A0J9YWL9 993 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 PRSS37A4D1T9 235 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 DPRXA6NFQ7 191 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 SEC14L2O76054 403 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 UBL3O95164 117 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 PPP1R3DO95685 299 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 ANXA8P13928 327 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 CBR1P16152 277 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 FASP25445 335 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 CD40P25942 277 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 ACTR3P61158 418 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 MRPS34P82930 218 aaKnown RBP13.1□□□□□ -0.31
RNF4-210ENST00000508235 ATP6AP1Q15904 470 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 GSG1Q2KHT4 349 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 MESTQ5EB52 335 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
RNF4-210ENST00000508235 SLC25A47Q6Q0C1 308 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
RNF4-210ENST00000508235 UTP4Q969X6 686 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms