RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 NCMAPQ5T1S8 102 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 ZNF770Q6IQ21 691 aaPredicted RBP11.88□□□□□ -0.51
FDPS-219ENST00000495308 LRFN4Q6PJG9 635 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 SMARCD3Q6STE5 483 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 ZNF813Q6ZN06 617 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 HDDC2Q7Z4H3 204 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 TMEM179BQ7Z7N9 219 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 LINC00471Q8N535 108 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 AQP11Q8NBQ7 271 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 PAPD5Q8NDF8 572 aaKnown RBP11.88□□□□□ -0.51
FDPS-219ENST00000495308 MCHR2Q969V1 340 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 Q96M85 177 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 ZNF570Q96NI8 536 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 FOXB1Q99853 325 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 NDEL1Q9GZM8 345 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 OR52D1Q9H346 318 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 CCM2LQ9NUG4 571 aaPredicted RBP11.88□□□□□ -0.51
FDPS-219ENST00000495308 ROS1P08922 2347 aa11.88□□□□□ -0.51
FDPS-219ENST00000495308 IGKV1D-43A0A0B4J1Z2 117 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 CENPBD1B2RD01 187 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 M0R1B8 84 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 DHHO43323 396 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 PPP1R3DO95685 299 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 WNT11O96014 354 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 GASTP01350 101 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 CAPZA2P47755 286 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 NR1H2P55055 460 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 SPOCK1Q08629 439 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 MESTQ5EB52 335 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 FAM122BQ7Z309 247 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 OR10G2Q8NGC3 310 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 MAGEE2Q8TD90 523 aaPredicted RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 GTPBP3Q969Y2 492 aaKnown RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 SAMD8Q96LT4 415 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 GPX7Q96SL4 187 aaPredicted RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
FDPS-219ENST00000495308 EGLN3Q9H6Z9 239 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 PLEKHF2Q9H8W4 249 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 UBTD1Q9HAC8 227 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 NRIP3Q9NQ35 241 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 GRHPRQ9UBQ7 328 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 IER3IP1Q9Y5U9 82 aa11.87□□□□□ -0.51
FDPS-219ENST00000495308 DSCAMO60469 2012 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 A6NIZ1 184 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 SOCS2O14508 198 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 ABCD4O14678 606 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 CD3EP07766 207 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 HOXB6P17509 224 aaKnown RBP11.86□□□□□ -0.51
FDPS-219ENST00000495308 RAP1BP61224 184 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 RAP1AP62834 184 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 KRR1Q13601 381 aaKnown RBP11.86□□□□□ -0.51
FDPS-219ENST00000495308 ADAM5Q6NVV9 412 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 CDH24Q86UP0 819 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 HS3ST5Q8IZT8 346 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 KBTBD8Q8NFY9 601 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 NSMAFQ92636 917 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 NEUROG1Q92886 237 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 NMD3Q96D46 503 aaKnown RBP11.86□□□□□ -0.51
FDPS-219ENST00000495308 TMEM204Q9BSN7 226 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 PLA2G12AQ9BZM1 189 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 STX18Q9P2W9 335 aaKnown RBP11.86□□□□□ -0.51
FDPS-219ENST00000495308 RNF115Q9Y4L5 304 aa11.86□□□□□ -0.51
FDPS-219ENST00000495308 IGHV1-18A0A0C4DH31 117 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 XKRYO14609 159 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 IMPA2O14732 288 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 E2F6O75461 281 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 HLA-HP01893 362 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 IGFBP1P08833 259 aaPredicted RBP11.85□□□□□ -0.51
FDPS-219ENST00000495308 CD79AP11912 226 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 SDHAP31040 664 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 SLC6A6P31641 620 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 CDAP32320 146 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 ZNF84P51523 738 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 RPS6KA3P51812 740 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 ZNF133P52736 654 aaPredicted RBP11.85□□□□□ -0.51
FDPS-219ENST00000495308 RFX4Q33E94 735 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 C10orf128Q5T292 105 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 FAM205BPQ63HN1 556 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 KLHL17Q6TDP4 642 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 TMEM108Q6UXF1 575 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 DPY19L2P2Q6ZN68 376 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 ZNF627Q7L945 461 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 SSX8Q7RTT4 187 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 MDP1Q86V88 176 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
FDPS-219ENST00000495308 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 GIPC3Q8TF64 312 aa11.85□□□□□ -0.51
FDPS-219ENST00000495308 ERMAPQ96PL5 475 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms