RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 INIPQ9NRY2 104 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 MAN2C1Q9NTJ4 1040 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 TMEM38BQ9NVV0 291 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 MED31Q9Y3C7 131 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 RTTNQ86VV8 2226 aa9.17□□□□□ -0.94
NELFE-213ENST00000494956 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 B9A039 149 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 MCIDASD6RGH6 385 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 SLC22A2O15244 555 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 DHHO43323 396 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 CD5LO43866 347 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 CCDC22O60826 627 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 SLC2A10O95528 541 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 SERPINA1P01009 418 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 IFNA14P01570 189 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 IFI30P13284 250 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 ZNF35P13682 527 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 NPR2P20594 1047 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 CDAP32320 146 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 RBM34P42696 430 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 CLRN1P58418 232 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 ERVS71-1P61550 626 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 TMEM249Q2WGJ8 235 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 TSEN54Q7Z6J9 526 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 LRRC18Q8N456 261 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 PAQR4Q8N4S7 273 aaPredicted RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 RNF148Q8N7C7 305 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 NOXO1Q8NFA2 376 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 OR4F15Q8NGB8 312 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 OR4K5Q8NGD3 323 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 NSMAFQ92636 917 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 HDAC2Q92769 488 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 HSH2DQ96JZ2 352 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 PRRC1Q96M27 445 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 FOXN4Q96NZ1 517 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 DOK1Q99704 481 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 SYT3Q9BQG1 590 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 MRPL13Q9BYD1 178 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 MRPL37Q9BZE1 423 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 MYLK2Q9H1R3 596 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 TPK1Q9H3S4 243 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 MRGBPQ9NV56 204 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
NELFE-213ENST00000494956 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 MALRD1Q5VYJ5 2156 aa9.16□□□□□ -0.94
NELFE-213ENST00000494956 TRAV27A0A087WT01 109 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 A0A1W2PRG6 482 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 VWC2LB2RUY7 222 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 LYNX1G3V0Z9 82 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 GSTA4O15217 222 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 CRLF1O75462 422 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 RAB36O95755 333 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 IGHG1P01857 330 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 TP53P04637 393 aaPredicted RBP9.15□□□□□ -0.94
NELFE-213ENST00000494956 ADRA2AP08913 450 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 TSPAN19P0C672 248 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FAM157BP0CG42 384 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 OR8G3PP0DMU2 310 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 LYNX1P0DP58 116 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ACADSP16219 412 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ZNF16P17020 682 aaPredicted RBP9.15□□□□□ -0.94
NELFE-213ENST00000494956 TCN1P20061 433 aaPredicted RBP9.15□□□□□ -0.94
NELFE-213ENST00000494956 DRD4P21917 467 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 NR4A1P22736 598 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ST3GAL3Q11203 375 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FHL1Q13642 323 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 GGTLC2Q14390 218 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 MAD2L1BPQ15013 274 aaPredicted RBP9.15□□□□□ -0.94
NELFE-213ENST00000494956 EFNB3Q15768 340 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ALKBH6Q3KRA9 238 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ARMC4Q5T2S8 1044 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FKBP9P1Q75LS8 142 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 CBLL1Q75N03 491 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 NRMQ8IXM6 262 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 CCDC36Q8IYA8 594 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FAM86B1Q8N7N1 296 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FAM156AQ8NDB6 213 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 OR51A7Q8NH64 312 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 BPIFA2Q96DR5 249 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 TNFRSF13CQ96RJ3 184 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 FNDC11Q9BVV2 318 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ZNF442Q9H7R0 627 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 RNF121Q9H920 327 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 EFCAB1Q9HAE3 211 aa9.15□□□□□ -0.94
NELFE-213ENST00000494956 ZNF346Q9UL40 294 aaKnown RBP9.15□□□□□ -0.94
NELFE-213ENST00000494956 A0A087WUU8 490 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 IGHV4-61A0A0C4DH41 118 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 CDC42EP2O14613 210 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 PDE5AO76074 875 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 DIRAS1O95057 198 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 PRSS23O95084 383 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 UBL3O95164 117 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 IFNW1P05000 195 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 IGHV4-31P0DP07 118 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 BMP4P12644 408 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 SLC25A16P16260 332 aa9.14□□□□□ -0.95
NELFE-213ENST00000494956 ZNF26P17031 533 aaPredicted RBP9.14□□□□□ -0.95
NELFE-213ENST00000494956 PAX7P23759 505 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms