RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TMEM54Q969K7 222 aa9.75□□□□□ -0.85
APTX-230ENST00000494649 MUCL1Q96DR8 90 aa9.75□□□□□ -0.85
APTX-230ENST00000494649 PLPPR2Q96GM1 343 aa9.75□□□□□ -0.85
APTX-230ENST00000494649 MUS81Q96NY9 551 aa9.75□□□□□ -0.85
APTX-230ENST00000494649 RAB3IPQ96QF0 476 aaPredicted RBP9.75□□□□□ -0.85
APTX-230ENST00000494649 MRPL13Q9BYD1 178 aaKnown RBP9.75□□□□□ -0.85
APTX-230ENST00000494649 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
APTX-230ENST00000494649 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 HTR3EA5X5Y0 456 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 DEFB108AA8MXU0 73 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ZNF99A8MXY4 864 aaPredicted RBP9.74□□□□□ -0.85
APTX-230ENST00000494649 H3BN98 237 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 M0R1B8 84 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 DEAF1O75398 565 aaPredicted RBP9.74□□□□□ -0.85
APTX-230ENST00000494649 CTAG2O75638 210 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 PLAUP00749 431 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 HLA-HP01893 362 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ZNF23P17027 643 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 FASP25445 335 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 SPOCK1Q08629 439 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 KRR1Q13601 381 aaKnown RBP9.74□□□□□ -0.85
APTX-230ENST00000494649 RFX4Q33E94 735 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 SLC36A3Q495N2 470 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 TIMM23BQ5SRD1 257 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 PTCHD4Q6ZW05 846 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 FAM122BQ7Z309 247 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 LRRC18Q8N456 261 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 IQCF1Q8N6M8 205 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ARIH2OSQ8N7S6 290 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 WDR31Q8NA23 367 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 OR4K13Q8NH42 304 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ZNF519Q8TB69 540 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 TSSK2Q96PF2 358 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 KCNK17Q96T54 332 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 FOXB1Q99853 325 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 SH3GL3Q99963 347 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 LIME1Q9H400 295 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 FN3KQ9H479 309 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 B3GAT2Q9NPZ5 323 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 NRIP3Q9NQ35 241 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 TBC1D23Q9NUY8 699 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 POFUT2Q9Y2G5 429 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 POLQO75417 2590 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 ITPR2Q14571 2701 aa9.74□□□□□ -0.85
APTX-230ENST00000494649 OR6C65A6NJZ3 312 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SAC3D1A6NKF1 404 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 H3BNX3 289 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 XKRYO14609 159 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 GPANK1O95872 356 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 CRYGSP22914 178 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 PEX19P40855 299 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 UBE2NP61088 152 aaKnown RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 NPRL3Q12980 569 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 TAF11Q15544 211 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 ATP6AP1Q15904 470 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 OR7E24Q6IFN5 339 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SEZ6L2Q6UXD5 910 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 SDR9C7Q8NEX9 313 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 HSD17B8Q92506 261 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 BCL2L2Q92843 193 aaPredicted RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 LRR1Q96L50 414 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 NMNAT3Q96T66 252 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 PKP2Q99959 881 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SYT4Q9H2B2 425 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SEC61A2Q9H9S3 476 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SLC17A5Q9NRA2 495 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 KIF17Q9P2E2 1029 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SLC25A15Q9Y619 301 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 NOTCH2Q04721 2471 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 APCP25054 2843 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 A0A1W2PPL8 197 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 FAM171A2A8MVW0 826 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 DHHO43323 396 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 IGHMP01871 453 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 HRGP04196 525 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 CELA3BP08861 270 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 CD79AP11912 226 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 HIST1H1CP16403 213 aaKnown RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 SDHAP31040 664 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SLC6A6P31641 620 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 CDKN2AP42771 156 aaKnown RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 ARHGDIAP52565 204 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 BSPH1Q075Z2 132 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 ADAM5Q6NVV9 412 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 DPY19L2P2Q6ZN68 376 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 PIAS4Q8N2W9 510 aaPredicted RBP9.73□□□□□ -0.85
APTX-230ENST00000494649 CYB561A3Q8NBI2 242 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 OR52L1Q8NGH7 329 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 FGFBP3Q8TAT2 258 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 NEUROG1Q92886 237 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 TSSK6Q9BXA6 273 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 SMURF2Q9HAU4 748 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 NOX3Q9HBY0 568 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 RASSF1Q9NS23 344 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 MGAT4BQ9UQ53 548 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 CDH10Q9Y6N8 788 aa9.73□□□□□ -0.85
APTX-230ENST00000494649 ROS1P08922 2347 aa9.72□□□□□ -0.85
APTX-230ENST00000494649 G3V2T6 193 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms