RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 IGF2P01344 180 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 IGLV1-44P01699 117 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 THY1P04216 161 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 CELA3BP08861 270 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 SLC25A16P16260 332 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 NCK1P16333 377 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 ITGA2P17301 1181 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 PDLIM4P50479 330 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 CRYBA2P53672 197 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 RAP1BP61224 184 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 RAP1AP62834 184 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 PHYHD1Q5SRE7 291 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 FAM205BPQ63HN1 556 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 C16orf89Q6UX73 402 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 OAFQ86UD1 273 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 TREML1Q86YW5 311 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 NRMQ8IXM6 262 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 OFCC1Q8IZS5 231 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 CIARTQ8N365 385 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-232ENST00000489053 ICA1LQ8NDH6 482 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 OR4K5Q8NGD3 323 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 OR1J2Q8NGS2 313 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM54Q969K7 222 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF837Q96EG3 531 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-232ENST00000489053 PRSS27Q9BQR3 290 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF426Q9BUY5 554 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 C1orf198Q9H425 327 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 MYOZ1Q9NP98 299 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-232ENST00000489053 MEPEQ9NQ76 525 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM38BQ9NVV0 291 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 CRNNQ9UBG3 495 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-232ENST00000489053 GPR160Q9UJ42 338 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 TMEM5Q9Y2B1 443 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 ARL2BPQ9Y2Y0 163 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 PLCE1Q9P212 2302 aa7.93□□□□□ -1.14
HDAC6-232ENST00000489053 CSPG4Q6UVK1 2322 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 A0A1W2PPW3 197 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SLC22A23A1A5C7 686 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SH3PXD2BA1X283 911 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 CENPBD1B2RD01 187 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 PIP5K1CO60331 668 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 STAMBPO95630 424 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 H1F0P07305 194 aaKnown RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 PGA4P0DJD7 388 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 PGA3P0DJD8 388 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ACADSP16219 412 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 TCN1P20061 433 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 DRD4P21917 467 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 CALCRP30988 508 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 APLNRP35414 380 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 THBS4P35443 961 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SLC9A3P48764 834 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SMIM11AP58511 58 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 MYBPC1Q00872 1141 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SGCAQ16586 387 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 TBC1D28Q2M2D7 210 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ANKDD1AQ495B1 522 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 IQCCQ4KMZ1 466 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SAMD4BQ5PRF9 694 aaKnown RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 GLYATQ6IB77 296 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 C11orf71Q6IPW1 123 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 UNQ6126/PRO20091Q6UXV3 157 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 CBLL1Q75N03 491 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 RNF113BQ8IZP6 322 aaKnown RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SVOPLQ8N434 492 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF525Q8N782 197 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 RNF148Q8N7C7 305 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 MAPK1IP1LQ8NDC0 245 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF540Q8NDQ6 660 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 RBM15BQ8NDT2 890 aaKnown RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SLC30A7Q8NEW0 376 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 OR51A7Q8NH64 312 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 MOSPD2Q8NHP6 518 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 FNDC8Q8TC99 324 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ASB10Q8WXI3 467 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ACOT11Q8WXI4 607 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-232ENST00000489053 NSMAFQ92636 917 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 MCHR2Q969V1 340 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SH3GL3Q99963 347 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 TXNIPQ9H3M7 391 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 NELFAQ9H3P2 528 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ZNF442Q9H7R0 627 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SEC61A2Q9H9S3 476 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 NOX3Q9HBY0 568 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 C20orf141Q9NUB4 165 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 GRHPRQ9UBQ7 328 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 EGFL7Q9UHF1 273 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 SLC7A8Q9UHI5 535 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 MAGEL2Q9UJ55 1249 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 AURKCQ9UQB9 309 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 V9GYQ6 96 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 PRR14LQ5THK1 2151 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 ABCA2Q9BZC7 2435 aa7.92□□□□□ -1.14
HDAC6-232ENST00000489053 TRAV27A0A087WT01 109 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 A0A1W2PPL8 197 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 NDUFS8O00217 210 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 MGRN1O60291 552 aa7.91□□□□□ -1.14
HDAC6-232ENST00000489053 F12P00748 615 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms