RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, human

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPSA-208	ENST00000487876	BDH2	Q9BUT1	245 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	MRPL13	Q9BYD1	178 aa	Known RBP	11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	CA10	Q9NS85	328 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	DCAF13	Q9NV06	445 aa	Known RBP	11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	TMEM38B	Q9NVV0	291 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	NDUFAF4	Q9P032	175 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	RPS6KA6	Q9UK32	745 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	HIF3A	Q9Y2N7	669 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	ENPP4	Q9Y6X5	453 aa		11.19	□□□□□ -0.62
RPSA-208	ENST00000487876	CDC42EP2	O14613	210 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ARPC2	O15144	300 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	DHH	O43323	396 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SSX4	O60224	188 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SLC2A10	O95528	541 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	LY6G6D	O95868	133 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SAG	P10523	405 aa	Predicted RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	HSD17B1	P14061	328 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ACADS	P16219	412 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ZNF14	P17017	642 aa	Predicted RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	PAX7	P23759	505 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	APOBEC3A	P31941	199 aa	Predicted RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	IFNA8	P32881	189 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	GIPR	P48546	466 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	PTDSS1	P48651	473 aa	Known RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	DAP3	P51398	398 aa	Known RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	RIPPLY3	P57055	190 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	VLDLR	P98155	873 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	PRKCD	Q05655	676 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	FMOD	Q06828	376 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ADIPOQ	Q15848	244 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	FXN	Q16595	210 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ALG10	Q5BKT4	473 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	CLEC9A	Q6UXN8	241 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ZNF730	Q6ZMV8	503 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	DNM1P46	Q6ZS02	220 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	MBOAT2	Q6ZWT7	520 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	DEFB107A	Q8IZN7	70 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SLC22A24	Q8N4F4	322 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	FITM2	Q8N6M3	262 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	CLDN22	Q8N7P3	220 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	LRRC75A	Q8NAA5	344 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	OR51A7	Q8NH64	312 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SLC7A13	Q8TCU3	470 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	HDAC2	Q92769	488 aa	Known RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	MCHR2	Q969V1	340 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	KCNK17	Q96T54	332 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	CDRT15	Q96T59	188 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SH3GL3	Q99963	347 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	CD300A	Q9UGN4	299 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	RTTN	Q86VV8	2226 aa		11.18	□□□□□ -0.62
RPSA-208	ENST00000487876	SON	P18583	2426 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	IGKV1D-43	A0A0B4J1Z2	117 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	TRBV4-1	A0A0J9YWV2	114 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	EFCAB9	A8MZ26	197 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	RNF223	E7ERA6	249 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	LY6H	O94772	140 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	SEMG1	P04279	462 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	OR4A8	P0C604	315 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	ZNF26	P17031	533 aa	Predicted RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	THBS4	P35443	961 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	MXRA7	P84157	204 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	RAB39A	Q14964	217 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	SEC23B	Q15437	767 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	SWI5	Q1ZZU3	235 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	IQCC	Q4KMZ1	466 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	FGD3	Q5JSP0	725 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	SAMD4B	Q5PRF9	694 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	KRT80	Q6KB66	452 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	PODNL1	Q6PEZ8	512 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	OAF	Q86UD1	273 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	CYP4Z1	Q86W10	505 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	ZNF584	Q8IVC4	421 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	CCDC36	Q8IYA8	594 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	ANKS4B	Q8N8V4	417 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	OR4K5	Q8NGD3	323 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	NANOS1	Q8WY41	292 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	NMD3	Q96D46	503 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	FAM46A	Q96IP4	442 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	TSPAN32	Q96QS1	320 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	TNFRSF13C	Q96RJ3	184 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	TXNIP	Q9H3M7	391 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	GORASP2	Q9H8Y8	452 aa		11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	MOV10	Q9HCE1	1003 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	SAMD4A	Q9UPU9	718 aa	Known RBP	11.17	□□□□□ -0.62
RPSA-208	ENST00000487876	NPIPB13	A6NJU9	1138 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	NPIPB4	C9JG80	1138 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876		H7C417	338 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	GPRIN2	O60269	458 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	RAB36	O95755	333 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	FAM107A	O95990	144 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	IGHM	P01871	453 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	HEXA	P06865	529 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	H1F0	P07305	194 aa	Known RBP	11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	OR8G3P	P0DMU2	310 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	CDA	P32320	146 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	SERPINF1	P36955	418 aa		11.16	□□□□□ -0.62
RPSA-208	ENST00000487876	NUDT6	P53370	316 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms