RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ASB6Q9NWX5 421 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 GLTPQ9NZD2 209 aa11.67□□□□□ -0.54
HDAC1-208ENST00000482310 TEX15Q9BXT5 2789 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 A6NIZ1 184 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 A8MXE2 369 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 RAD51DO75771 328 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 QDPRP09417 244 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 IGHV1-2P23083 117 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 CDKN2AP42771 156 aaKnown RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 RAD23AP54725 363 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 RAP1BP61224 184 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 RAP1AP62834 184 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 NPRL3Q12980 569 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 PTGES3Q15185 160 aaKnown RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 CEACAM16Q2WEN9 425 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 OGFRL1Q5TC84 451 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 OTPQ5XKR4 325 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 GPR139Q6DWJ6 353 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 PARP8Q8N3A8 854 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 POMGNT2Q8NAT1 580 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 OR9Q1Q8NGQ5 310 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 MBOAT4Q96T53 435 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 SYT4Q9H2B2 425 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 MED20Q9H944 212 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 GPR35Q9HC97 309 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 TVP23BQ9NYZ1 205 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 FOXD3Q9UJU5 478 aaPredicted RBP11.66□□□□□ -0.54
HDAC1-208ENST00000482310 GPR52Q9Y2T5 361 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
HDAC1-208ENST00000482310 HEATR1Q9H583 2144 aaKnown RBP11.65□□□□□ -0.54
HDAC1-208ENST00000482310 A0A096LPE4 126 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 IGKV1D-43A0A0B4J1Z2 117 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 A0A1W2PPL8 197 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 A0A1W2PPZ6 126 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 A0A1W2PR80 420 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 CIB4A0PJX0 185 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 PRSS37A4D1T9 235 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 FAM183AA6NL82 134 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 RIIAD1A6NNX1 92 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 FAM171A2A8MVW0 826 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 CASQ2O14958 399 aaPredicted RBP11.65□□□□□ -0.54
HDAC1-208ENST00000482310 GPANK1O95872 356 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 RENP00797 406 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ITGA5P08648 1049 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 IL32P24001 234 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 GRK5P34947 590 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ESRRGP62508 458 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ITGADQ13349 1161 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 STK11Q15831 433 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ETFDHQ16134 617 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 FAM205BPQ63HN1 556 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 Q6ZT83 130 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 GABRG1Q8N1C3 465 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 LNX2Q8N448 690 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 SLC37A3Q8NCC5 494 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 CYGBQ8WWM9 190 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 TSSK2Q96PF2 358 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 PSMG3-AS1Q96PY0 264 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 GABARAPL3Q9BY60 117 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 LINC00470Q9BZP3 86 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 JKAMPQ9P055 326 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 MALT1Q9UDY8 824 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ENOPH1Q9UHY7 261 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 BAIAP2Q9UQB8 552 aa11.65□□□□□ -0.54
HDAC1-208ENST00000482310 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 SLC22A23A1A5C7 686 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 OR6C68A6NDL8 312 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 TXNDC12O95881 172 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 IFNGP01579 166 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 GYPBP06028 91 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 B4GALT1P15291 398 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 ZNF3P17036 446 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 AGAP20933 346 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 CCKARP32238 428 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 CDAP32320 146 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 CD79BP40259 229 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 GIPRP48546 466 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 CDK5Q00535 292 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 RIPK1Q13546 671 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 CRMP1Q14194 572 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 SNAPC1Q16533 368 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 LRFN4Q6PJG9 635 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 KLHL24Q6TFL4 600 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 BHLHA15Q7RTS1 189 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-208ENST00000482310 ABHD12BQ7Z5M8 362 aaPredicted RBP11.64□□□□□ -0.55
HDAC1-208ENST00000482310 ADCK1Q86TW2 530 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 OR51L1Q8NGJ5 315 aa11.64□□□□□ -0.55
HDAC1-208ENST00000482310 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms