RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 DPH1Q9BZG8 443 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 C5AR2Q9P296 337 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 GNG8Q9UK08 70 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 SH2B3Q9UQQ2 575 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
HDAC1-206ENST00000476391 PLPP1O14494 284 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 FKTNO75072 461 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 MED6O75586 246 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ZBTB25P24278 435 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 RPS12P25398 132 aaKnown RBP12.6□□□□□ -0.39
HDAC1-206ENST00000476391 TNFRSF9Q07011 255 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 CRMP1Q14194 572 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 FNDC3BQ53EP0 1204 aaKnown RBP12.6□□□□□ -0.39
HDAC1-206ENST00000476391 PRRT3Q5FWE3 981 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
HDAC1-206ENST00000476391 DENND4CQ5VZ89 1909 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 NXPE4Q6UWF7 544 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF227Q86WZ6 799 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 OR4C6Q8NH72 309 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM159Q96B96 161 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 MOAP1Q96BY2 351 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 PRO1933Q9H354 126 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 PTGES2Q9H7Z7 377 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 LHX9Q9NQ69 397 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 C19orf12Q9NSK7 152 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 LTBP3Q9NS15 1303 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 SMAD9O15198 467 aaKnown RBP12.6□□□□□ -0.39
HDAC1-206ENST00000476391 IL2RAP01589 272 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 MPZP25189 248 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 TMEM64Q6YI46 380 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 TMPRSS12Q86WS5 348 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 ACBD4Q8NC06 268 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 OTUB2Q96DC9 234 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
HDAC1-206ENST00000476391 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 NDUFAF3Q9BU61 184 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 UBQLN4Q9NRR5 601 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 SLC7A7Q9UM01 511 aa12.6□□□□□ -0.39
HDAC1-206ENST00000476391 A8MWP6 167 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 PLGP00747 810 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CRYABP02511 175 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 AMY2AP04746 511 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 ARG1P05089 322 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 DAOP14920 347 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 SULT1A2P50226 295 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 RAP1AP62834 184 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 MEF2AQ02078 507 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 HNF4GQ14541 408 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 DEFB132Q7Z7B7 95 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 SLC25A42Q86VD7 318 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 APOBEC3FQ8IUX4 373 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 LYPD6BQ8NI32 183 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CNN2Q99439 309 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 NMES1Q9C002 83 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 NTNG1Q9Y2I2 539 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 TRAV18A0A075B6X5 111 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 KCNAB3O43448 404 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 DCNP07585 359 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 ADRA2CP18825 462 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 S1PR1P21453 382 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CD1CP29017 333 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 HSD17B7P56937 341 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 TGM3Q08188 693 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 GGTLC2Q14390 218 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CCDC116Q8IYX3 515 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CARFQ8N187 725 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 FRMD1Q8N878 549 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 GALNT14Q96FL9 552 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 FAM83CQ9BQN1 747 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 GLIPR2Q9H4G4 154 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF107Q9UII5 783 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 KCNG2Q9UJ96 466 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 ZNF223Q9UK11 482 aaPredicted RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
HDAC1-206ENST00000476391 ICAM5Q9UMF0 924 aa12.59□□□□□ -0.39
HDAC1-206ENST00000476391 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TBC1D3BA6NDS4 549 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 PPP1R2P9O14990 202 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 AGPAT2O15120 278 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 GYPBP06028 91 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 NR2C1P13056 603 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 MYOGP15173 224 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 TIMP2P16035 220 aa12.58□□□□□ -0.4
HDAC1-206ENST00000476391 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
HDAC1-206ENST00000476391 VGLL4Q14135 290 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms