RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TSPAN32Q96QS1 320 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 KATNB1Q9BVA0 655 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 CXorf56Q9H5V9 222 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 NOX3Q9HBY0 568 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 FAIMQ9NVQ4 179 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 CISD1Q9NZ45 108 aaKnown RBP11.24□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF224Q9NZL3 707 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 LAMP3Q9UQV4 416 aa11.24□□□□□ -0.61
COL5A1-206ENST00000465877 SH3PXD2BA1X283 911 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 DHHO43323 396 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 TMCC2O75069 709 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
COL5A1-206ENST00000465877 CELA3BP08861 270 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 QDPRP09417 244 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 NR2C1P13056 603 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 PTH2RP49190 550 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 CTXN1P60606 82 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 RPL27P61353 136 aaKnown RBP11.23□□□□□ -0.61
COL5A1-206ENST00000465877 MYBPC1Q00872 1141 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 FMODQ06828 376 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 NPRL3Q12980 569 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 GSG1Q2KHT4 349 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 Q5PR19 223 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 C10orf128Q5T292 105 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 FAM205BPQ63HN1 556 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 CCDC36Q8IYA8 594 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 FAM169BQ8N8A8 192 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF519Q8TB69 540 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 FANK1Q8TC84 345 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 SMAP2Q8WU79 429 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-206ENST00000465877 MCHR2Q969V1 340 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 TNFRSF13CQ96RJ3 184 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 KCNS3Q9BQ31 491 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 THTPAQ9BU02 230 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 TRAF4Q9BUZ4 470 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-206ENST00000465877 GSX2Q9BZM3 304 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 MAGIXQ9H6Y5 334 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 TMEM38BQ9NVV0 291 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 MOKQ9UQ07 419 aa11.23□□□□□ -0.61
COL5A1-206ENST00000465877 E7EQL1 145 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 GYG2O15488 501 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 UBL3O95164 117 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 SLC2A10O95528 541 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 STAMBPO95630 424 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 HLA-HP01893 362 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 CRYAAP02489 173 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF26P17031 533 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ARR3P36575 388 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ACVR1BP36896 505 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF84P51523 738 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF133P52736 654 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-206ENST00000465877 SMIM11AP58511 58 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 MS4A2Q01362 244 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 NAAAQ02083 359 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ZBED5Q49AG3 693 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 LRFN4Q6PJG9 635 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 PIWIL3Q7Z3Z3 882 aaKnown RBP11.22□□□□□ -0.61
COL5A1-206ENST00000465877 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 CLDN22Q8N7P3 220 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 HTRA1Q92743 480 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ZNF570Q96NI8 536 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 DHRS9Q9BPW9 319 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ALG12Q9BV10 488 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 TRIM15Q9C019 465 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 SMURF2Q9HAU4 748 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 AURKCQ9UQB9 309 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 SIGLEC7Q9Y286 467 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 LYVE1Q9Y5Y7 322 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 ATP23Q9Y6H3 246 aa11.22□□□□□ -0.61
COL5A1-206ENST00000465877 USF3Q68DE3 2245 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 A6NIZ1 184 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 H7C1C5 153 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 OR10H3O60404 316 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ENTPD5O75356 428 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 NDUFB2O95178 105 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 FARS2O95363 451 aaKnown RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 RAB36O95755 333 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CD14P08571 375 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CD79AP11912 226 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 PAX1P15863 534 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CBR1P16152 277 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CALCRP30988 508 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 TTKP33981 857 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 CDKN1AP38936 164 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 PTDSS1P48651 473 aaKnown RBP11.21□□□□□ -0.61
COL5A1-206ENST00000465877 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 RAP1BP61224 184 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 LCN6P62502 163 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 RAP1AP62834 184 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ERVK-25P63136 954 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 ADAM8P78325 824 aa11.21□□□□□ -0.61
COL5A1-206ENST00000465877 NKX6-1P78426 367 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms