RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ZNF84P51523 738 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 CTXN1P60606 82 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 TUBA1BP68363 451 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 TUBA4AP68366 448 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATG4B-213ENST00000460211 ZBED5Q49AG3 693 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 PODNL1Q6PEZ8 512 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 PRSS57Q6UWY2 283 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 TUBA1AQ71U36 451 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 TSEN54Q7Z6J9 526 aaKnown RBP13.02□□□□□ -0.33
ATG4B-213ENST00000460211 NOXO1Q8NFA2 376 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 FNDC8Q8TC99 324 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 DENND2DQ9H6A0 471 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-213ENST00000460211 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-213ENST00000460211 MOKQ9UQ07 419 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 AURKCQ9UQB9 309 aa13.02□□□□□ -0.33
ATG4B-213ENST00000460211 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 A6NIZ1 184 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 E7EQL1 145 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 MGRN1O60291 552 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TRMUO75648 421 aaKnown RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 DIRAS1O95057 198 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 UBL3O95164 117 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 GADD45GO95257 159 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 IGKV3-15P01624 115 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 IGLV1-44P01699 117 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 SOD3P08294 240 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 OR8G3PP0DMU2 310 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 B4GALT1P15291 398 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 PAX1P15863 534 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 FUT4P22083 530 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TTKP33981 857 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 IFNGR2P38484 337 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 GPR4P46093 362 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 ATP5J2P56134 94 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RAP1BP61224 184 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RPL27P61353 136 aaKnown RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RAP1AP62834 184 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 SPIBQ01892 262 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 SPOCK1Q08629 439 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TRIM25Q14258 630 aaKnown RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 GSG1Q2KHT4 349 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 PGGHGQ32M88 737 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 LRFN4Q6PJG9 635 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 CYP2R1Q6VVX0 501 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RINLQ6ZS11 566 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 DPPA2Q7Z7J5 298 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 MDP1Q86V88 176 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 DHFR2Q86XF0 187 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 CIARTQ8N365 385 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 MUC15Q8N387 334 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 SYT14Q8NB59 555 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 OR4F15Q8NGB8 312 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 OR13C2Q8NGS9 318 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 IGFBPL1Q8WX77 278 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 LRGUKQ96M69 825 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 RBP7Q96R05 134 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TNFRSF13CQ96RJ3 184 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 MRPL13Q9BYD1 178 aaKnown RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 IL1RAPQ9NPH3 570 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 ZNF701Q9NV72 531 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-213ENST00000460211 FBXL3Q9UKT7 428 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 TMCC3Q9ULS5 477 aa13.01□□□□□ -0.33
ATG4B-213ENST00000460211 USF3Q68DE3 2245 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 ATP6V1G2-DDX39BF2Z307 99 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 SMAD7O15105 426 aaKnown RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 RAB36O95755 333 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 HLA-HP01893 362 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 SEMG1P04279 462 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 CECR9P0C854 216 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 ACVR1BP36896 505 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 GUCA1AP43080 201 aaPredicted RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 IDH3GP51553 393 aaPredicted RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 NAAAQ02083 359 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 CHRNB3Q05901 458 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 RUNX1T1Q06455 604 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 CD47Q08722 323 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 NPRL3Q12980 569 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 HIST3H3Q16695 136 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 NRN1LQ496H8 165 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 Q5PR19 223 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 YTHDF3Q7Z739 585 aaKnown RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 DTX2Q86UW9 622 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 MEX3DQ86XN8 651 aaKnown RBP13□□□□□ -0.33
ATG4B-213ENST00000460211 ZDHHC21Q8IVQ6 265 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 WDFY1Q8IWB7 410 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 SLC22A24Q8N4F4 322 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 OR4K5Q8NGD3 323 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 MCHR2Q969V1 340 aa13□□□□□ -0.33
ATG4B-213ENST00000460211 FAM46AQ96IP4 442 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms