RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 ZNF566Q969W8 418 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 SNX18Q96RF0 628 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 SYT3Q9BQG1 590 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 MS4A5Q9H3V2 200 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 NANOGQ9H9S0 305 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 NANSQ9NR45 359 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 REV1Q9UBZ9 1251 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 FBXL3Q9UKT7 428 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 TRIM33Q9UPN9 1127 aa12.35□□□□□ -0.43
TNFRSF1A-203ENST00000437813 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 WNT9BO14905 357 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 ANGPT2O15123 496 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 SNAP29O95721 258 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 MMP7P09237 267 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 OR8G3PP0DMU2 310 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 ZNF250P15622 560 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 ALDH3B1P43353 468 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 NFYCQ13952 458 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 RABL3Q5HYI8 236 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 TTC33Q6PID6 262 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 LINC01356Q8N9X3 169 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 YIPF5Q969M3 257 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 SH3GL3Q99963 347 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 NPHS2Q9NP85 383 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
TNFRSF1A-203ENST00000437813 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 KPNA4O00629 521 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RAB36O95755 333 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 MT-ND1P03886 318 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 QDPRP09417 244 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ACHEP22303 614 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 UGT2B15P54855 530 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RPS23P62266 143 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TMEM255AQ5JRV8 349 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 C10orf128Q5T292 105 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ARMC4Q5T2S8 1044 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 INTS11Q5TA45 600 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NKAIN4Q8IVV8 208 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 OR4K5Q8NGD3 323 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 CLDND2Q8NHS1 167 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ASB10Q8WXI3 467 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 MCHR2Q969V1 340 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ZNF583Q96ND8 569 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 SIKE1Q9BRV8 207 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 C20orf141Q9NUB4 165 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TMEFF2Q9UIK5 374 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 SPEF1Q9Y4P9 236 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 UGT2A1Q9Y4X1 527 aa12.33□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RNF13O43567 381 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 OR6A2O95222 327 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 CLPTM1O96005 669 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 HNF1AP20823 631 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 FUT4P22083 530 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RBM34P42696 430 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 LMO4P61968 165 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 FHL1Q13642 323 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 COQ5Q5HYK3 327 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 SLC30A7Q8NEW0 376 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NOXO1Q8NFA2 376 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 OR8J3Q8NGG0 315 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 RDH5Q92781 318 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TSPAN32Q96QS1 320 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 VIPAS39Q9H9C1 493 aa12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 ZNF275Q9NSD4 429 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-203ENST00000437813 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 IGKV1D-43A0A0B4J1Z2 117 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 MGRN1O60291 552 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 OR7A10O76100 309 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 BCL10O95999 233 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 IGHG1P01857 330 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 F13BP05160 661 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NAT2P11245 290 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 CCL2P13500 99 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 TMEM33P57088 247 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 CCNIQ14094 377 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 CGB2Q6NT52 195 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 UGT2A3Q6UWM9 527 aa12.31□□□□□ -0.44
TNFRSF1A-203ENST00000437813 NANOGNBQ7Z5D8 188 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms