RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.21
CD40-201ENST00000372276 PCDH15Q96QU1 1955 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 ANKUB1A6NFN9 424 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 TVP23AA6NH52 213 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 PRR32B1ATL7 298 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 TGM6O95932 706 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 ANKRD34CP0C6C1 535 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 APOBEC1P41238 236 aaKnown RBP16.33■□□□□ 0.2
CD40-201ENST00000372276 CAPZA1P52907 286 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 CFHR1Q03591 330 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 SLC17A1Q14916 467 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 ACKR1Q16570 336 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 GSG1Q2KHT4 349 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 OLFML2AQ68BL7 652 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 TMEM71Q6P5X7 295 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 ADGRG3Q86Y34 549 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 PM20D2Q8IYS1 436 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 RNF128Q8TEB7 428 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 MCHR2Q969V1 340 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 SLC25A38Q96DW6 304 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 SLC25A18Q9H1K4 315 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 CDV3Q9UKY7 258 aaKnown RBP16.33■□□□□ 0.2
CD40-201ENST00000372276 KLHDC2Q9Y2U9 406 aa16.33■□□□□ 0.2
CD40-201ENST00000372276 TRAV6A0A075B6T7 132 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 A0A0B4J203 849 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 IDSB3KWA1 339 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 DCTN6O00399 190 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 ZNF593O00488 134 aaPredicted RBP16.32■□□□□ 0.2
CD40-201ENST00000372276 PLPP3O14495 311 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 KHNYNO15037 678 aaKnown RBP16.32■□□□□ 0.2
CD40-201ENST00000372276 PRKNO60260 465 aaPredicted RBP16.32■□□□□ 0.2
CD40-201ENST00000372276 PEX14O75381 377 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 PSMB1P20618 241 aaKnown RBP16.32■□□□□ 0.2
CD40-201ENST00000372276 MSX1P28360 303 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 RNF4P78317 190 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 GLO1Q04760 184 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 SSBP1Q04837 148 aaKnown RBP16.32■□□□□ 0.2
CD40-201ENST00000372276 FCN2Q15485 313 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 TEX30Q5JUR7 227 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 METTL11BQ5VVY1 283 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 DTX3Q8N9I9 347 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 OR5L2Q8NGL0 311 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 OR8K3Q8NH51 312 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 TTC9Q92623 222 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 HGDQ93099 445 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 PHF21AQ96BD5 680 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 SLC25A36Q96CQ1 311 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 RADILQ96JH8 1075 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 IER2Q9BTL4 223 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 ANKRD10Q9NXR5 420 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 FBXL3Q9UKT7 428 aa16.32■□□□□ 0.2
CD40-201ENST00000372276 ZNF208O43345 1280 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 ZNF780AO75290 641 aaPredicted RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 KHDRBS3O75525 346 aaKnown RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 HLA-DQA2P01906 255 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 CSF2RBP32927 897 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 DAP3P51398 398 aaKnown RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 TOMM34Q15785 309 aaPredicted RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 DNM1P46Q6ZS02 220 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 SLC25A45Q8N413 288 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 MFSD8Q8NHS3 518 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 HSD17B8Q92506 261 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 CLDN23Q96B33 292 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 NRSN2Q9GZP1 204 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 TSPAN10Q9H1Z9 355 aaPredicted RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
CD40-201ENST00000372276 HRASLSQ9HDD0 168 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 EML5Q05BV3 1969 aa16.31■□□□□ 0.2
CD40-201ENST00000372276 ANKRD20A5PA0PJZ0 165 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SLC22A23A1A5C7 686 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 MEGF11A6BM72 1044 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 PSMD9O00233 223 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 XRCC3O43542 346 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 ONECUT2O95948 504 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 CD2P06729 351 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 PTH2RP49190 550 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 RIDAP52758 137 aaKnown RBP16.3■□□□□ 0.2
CD40-201ENST00000372276 DEGS2Q6QHC5 323 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 FAM109AQ8N4B1 249 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 TMEM106AQ96A25 262 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 RTN4RQ9BZR6 473 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 ELOVL3Q9HB03 270 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SDHAF3Q9NRP4 125 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 PLSCR3Q9NRY6 295 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SLCO1C1Q9NYB5 712 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 CKLFQ9UBR5 152 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 GON4LQ3T8J9 2241 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 IGLV1-36A0A0B4J1U3 117 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 A0A1B0GUH1 482 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 CDC14CA4D256 554 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 C11orf98E9PRG8 122 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 H7C1C5 153 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 ALX3O95076 343 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 HEXBP07686 556 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SYPP08247 313 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SULT1A3P0DMM9 295 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 SULT1A4P0DMN0 295 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 CXCL12P48061 93 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 LCN6P62502 163 aa16.3■□□□□ 0.2
CD40-201ENST00000372276 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms