RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 A0A0J9YYE9 177 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 A0A1W2PPR1 153 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR52A4PA6NMU1 304 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 ANGPT2O15123 496 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 TOX3O15405 576 aaPredicted RBP4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 TYROBPO43914 113 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 MTX2O75431 263 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 MBD3O95983 291 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 TRBC1P01850 177 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 CALB1P05937 261 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 WNT2P09544 360 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 SPINT3P49223 89 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRRK1Q38SD2 2015 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 ARMC12Q5T9G4 340 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 LEMD1Q68G75 181 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 ASPHD2Q6ICH7 369 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 DNAJC24Q6P3W2 148 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 CBLN3Q6UW01 205 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 FAM92BQ6ZTR7 304 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 APTXQ7Z2E3 356 aaKnown RBP4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 GPR26Q8NDV2 337 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 FDCSPQ8NFU4 85 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 THRSPQ92748 146 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 RBM18Q96H35 190 aaKnown RBP4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 CSPG4P5Q96PW8 444 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 LYSMD1Q96S90 227 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 OR2AG1Q9H205 316 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 RIBC2Q9H4K1 309 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 COG4Q9H9E3 785 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 CALHM2Q9HA72 323 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 PALMDQ9NP74 551 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 NT5MQ9NPB1 228 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 RNF24Q9Y225 148 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 FARSAQ9Y285 508 aaKnown RBP4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 DCHS2Q6V1P9 2916 aa4.42□□□□□ -1.7
RNU4-39P-201ENST00000362455 LRP4O75096 1905 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 A0A1W2PQ67 120 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 WASHC1A8K0Z3 465 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 C21orf140B9A014 251 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 C11orf98E9PRG8 122 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 LCA5LO95447 670 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 RENP00797 406 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 IGHV3-9P01782 118 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 KRT8P05787 483 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 MELTFP08582 738 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 UQCRBP14927 111 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 PSMA2P25787 234 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 CASP14P31944 242 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 SOX6P35712 828 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 HSPA9P38646 679 aaKnown RBP4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 CAPZBP47756 277 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 ARHGDIAP52565 204 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 ZNF235Q14590 738 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 RAB35Q15286 201 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 SYCP1Q15431 976 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 DPYSL2Q16555 572 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 MARC1Q5VT66 337 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 DCUN1D2Q6PH85 259 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 CSNK1G2-AS1Q8NCQ2 148 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 IPMKQ8NFU5 416 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 UPRTQ96BW1 309 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 DNAJA3Q96EY1 480 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 C11orf24Q96F05 449 aaPredicted RBP4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 VPS39Q96JC1 886 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 TRIB3Q96RU7 358 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 RAB33BQ9H082 229 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 AMBNQ9NP70 447 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 EXOSC1Q9Y3B2 195 aaKnown RBP4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 CSAG2Q9Y5P2 127 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 AP4B1Q9Y6B7 739 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 CACNA1DQ01668 2161 aa4.41□□□□□ -1.7
RNU4-39P-201ENST00000362455 ACOD1A6NK06 481 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR5K4A6NMS3 321 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 PES1O00541 588 aaKnown RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 E2F3O00716 465 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 MFSD11O43934 449 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 KLF7O75840 302 aaPredicted RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 MFN2O95140 757 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 IGHV3-13P01766 116 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 HLA-DQB2P05538 268 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 HOXD4P09016 255 aaPredicted RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 PIRTP0C851 137 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF30P17039 623 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF7P17097 686 aaPredicted RBP4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 HTR2AP28223 471 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 RORAP35398 523 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 PEX6Q13608 980 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 UBE2V2Q15819 145 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 CHRNA6Q15825 494 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZIC1Q15915 447 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 NHLRC3Q5JS37 347 aa4.4□□□□□ -1.71
RNU4-39P-201ENST00000362455 NCR3LG1Q68D85 454 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms