RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 STAMBPO95630 424 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 IGFBP1P08833 259 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 QDPRP09417 244 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 FAM157CP0CG43 387 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 DAOP14920 347 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 ZNF133P52736 654 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 UGT2B15P54855 530 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 RPS23P62266 143 aaKnown RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 SELENOWP63302 87 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 RPL18Q07020 188 aaKnown RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 PIN1Q13526 163 aaPredicted RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 FXNQ16595 210 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 CYBRD1Q53TN4 286 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 ZNF786Q8N393 782 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 OR2T12Q8NG77 320 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 SPATA3Q8NHX4 192 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 RP9Q8TA86 221 aaKnown RBP15.3■□□□□ 0.04
HDDC3-201ENST00000330334 TMEM255BQ8WV15 326 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 SGTBQ96EQ0 304 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 MS4A5Q9H3V2 200 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 LPAR3Q9UBY5 353 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 MED31Q9Y3C7 131 aa15.3■□□□□ 0.04
HDDC3-201ENST00000330334 ELOVL7A1L3X0 281 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 SYNGR3O43761 229 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 ZNF23P17027 643 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 TNFRSF1BP20333 461 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 OR1E2P47887 323 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 DAP3P51398 398 aaKnown RBP15.29■□□□□ 0.04
HDDC3-201ENST00000330334 GALK2Q01415 458 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 GGTLC2Q14390 218 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 DEF8Q6ZN54 512 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 ARPINQ7Z6K5 226 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 ZNF584Q8IVC4 421 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 MICU2Q8IYU8 434 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 CDK20Q8IZL9 346 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 MCHR2Q969V1 340 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 C1orf198Q9H425 327 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 C20orf141Q9NUB4 165 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 SLC7A8Q9UHI5 535 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 RTTNQ86VV8 2226 aa15.29■□□□□ 0.04
HDDC3-201ENST00000330334 STAB1Q9NY15 2570 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 IGHV4-61A0A0C4DH41 118 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 SLC22A23A1A5C7 686 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 LMX1BO60663 402 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 ADRA2AP08913 450 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
HDDC3-201ENST00000330334 IFNA8P32881 189 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 LSP1P33241 339 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 THBS2P35442 1172 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 CLRN1P58418 232 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 GUCY1A3Q02108 690 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 ST3GAL3Q11203 375 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 MELKQ14680 651 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 RAB39AQ14964 217 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 MSMPQ1L6U9 139 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 CXXC5Q7LFL8 322 aaKnown RBP15.28■□□□□ 0.04
HDDC3-201ENST00000330334 ZCCHC24Q8N2G6 241 aaKnown RBP15.28■□□□□ 0.04
HDDC3-201ENST00000330334 PFN4Q8NHR9 129 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 FGFBP3Q8TAT2 258 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 UBASH3BQ8TF42 649 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 ASB10Q8WXI3 467 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 MRPL37Q9BZE1 423 aaKnown RBP15.28■□□□□ 0.04
HDDC3-201ENST00000330334 BPESC1Q9GZL8 116 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 SMURF2Q9HAU4 748 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 DYNLRB1Q9NP97 96 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 INIPQ9NRY2 104 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 REV1Q9UBZ9 1251 aa15.28■□□□□ 0.04
HDDC3-201ENST00000330334 SH3PXD2BA1X283 911 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 SHOX2O60902 331 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-201ENST00000330334 TRMUO75648 421 aaKnown RBP15.27■□□□□ 0.04
HDDC3-201ENST00000330334 PTHP01270 115 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 F13BP05160 661 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 TACSTD2P09758 323 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 ACADSP16219 412 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 AQP2P41181 271 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 ZNF84P51523 738 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 RUNX1T1Q06455 604 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 TAF11Q15544 211 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 CARTPTQ16568 116 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 SLC36A2Q495M3 483 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 IQCCQ4KMZ1 466 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 HSP90B2PQ58FF3 399 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 C10orf128Q5T292 105 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 ARMC4Q5T2S8 1044 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 GKAP1Q5VSY0 366 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-201ENST00000330334 FAM166AQ6J272 317 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 TMEM53Q6P2H8 277 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 OR4K5Q8NGD3 323 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 HPS1Q92902 700 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 MSI2Q96DH6 328 aaKnown RBP15.27■□□□□ 0.04
HDDC3-201ENST00000330334 PRRC1Q96M27 445 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 SH3GL3Q99963 347 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 HOPXQ9BPY8 73 aaPredicted RBP15.27■□□□□ 0.04
HDDC3-201ENST00000330334 BEX2Q9BXY8 128 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 MED4Q9NPJ6 270 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 CMTM6Q9NX76 183 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 A4GNTQ9UNA3 340 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 HIF3AQ9Y2N7 669 aa15.27■□□□□ 0.04
HDDC3-201ENST00000330334 SVEP1Q4LDE5 3571 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms