RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CAMK2BQ13554 666 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 OR1C1Q15619 314 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ZNF684Q5T5D7 378 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ARL9Q6T311 187 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 GDPGP1Q6ZNW5 385 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 SLC16A9Q7RTY1 509 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 DPY19L4Q7Z388 723 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 BTLAQ7Z6A9 289 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 GALNT16Q8N428 558 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 THAP4Q8WY91 577 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 KIAA1143Q96AT1 154 aaPredicted RBP16.47■□□□□ 0.23
USP39-201ENST00000323701 DACH2Q96NX9 599 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 PPIL3Q9H2H8 161 aaKnown RBP16.47■□□□□ 0.23
USP39-201ENST00000323701 TPK1Q9H3S4 243 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 TRIM36Q9NQ86 728 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ST6GALNAC2Q9UJ37 374 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 GNG8Q9UK08 70 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 HDGFL3Q9Y3E1 203 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 A0A0J9YW62 118 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 PROB1E7EW31 1015 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 SLC30A4O14863 429 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 LIPCP11150 499 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 CNR1P21554 472 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 WIPI1Q5MNZ9 446 aaPredicted RBP16.46■□□□□ 0.23
USP39-201ENST00000323701 C16orf87Q6PH81 154 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 CDC20BQ86Y33 519 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 OR6N2Q8NGY6 317 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 SNX33Q8WV41 574 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 PGLYRP3Q96LB9 341 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 IP6K3Q96PC2 410 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 UCN2Q96RP3 112 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 UTP23Q9BRU9 249 aaKnown RBP16.46■□□□□ 0.23
USP39-201ENST00000323701 MARCH7Q9H992 704 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 FKBP7Q9Y680 259 aa16.46■□□□□ 0.23
USP39-201ENST00000323701 GABRPO00591 440 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 TRAF3IP2O43734 574 aaPredicted RBP16.45■□□□□ 0.22
USP39-201ENST00000323701 SRD5A2P31213 254 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 CENPAP49450 140 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 PSMD7P51665 324 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 H3F3AP84243 136 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 SLC3A1Q07837 685 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 GPALPP1Q8IXQ4 340 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 OR13C5Q8NGS8 318 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 OR14L1PQ8NHC6 308 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 MCFD2Q8NI22 146 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 FER1L6-AS2Q96M78 137 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 SNTG1Q9NSN8 517 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 KLHL13Q9P2N7 655 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 COA3Q9Y2R0 106 aaPredicted RBP16.45■□□□□ 0.22
USP39-201ENST00000323701 PCDHGB7Q9Y5F8 929 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
USP39-201ENST00000323701 TNFSF11O14788 317 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 CELA3AP09093 270 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 STARP49675 285 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 DMKNQ6E0U4 476 aaPredicted RBP16.45■□□□□ 0.22
USP39-201ENST00000323701 OR2M7Q8NG81 312 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 OR6Q1Q8NGQ2 317 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 HSD17B8Q92506 261 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 SNX18Q96RF0 628 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 IRF2BPLQ9H1B7 796 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 ZFP64Q9NPA5 681 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 KCNG2Q9UJ96 466 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 TRAPPC4Q9Y296 219 aa16.45■□□□□ 0.22
USP39-201ENST00000323701 TRDV1A0A1B0GX56 115 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 AQP7P3A6NL99 342 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 PLPP2O43688 288 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 TRAPPC6AO75865 159 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 CDRT1O95170 752 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 ZNF17P17021 662 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 SDC2P34741 201 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 DAP3P51398 398 aaKnown RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 ZNF404Q494X3 552 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 FAM27D1Q5T7N8 215 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 TMEM225Q6GV28 225 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 LRRC69Q6ZNQ3 347 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 DCDC5Q6ZRR9 648 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 SULF2Q8IWU5 870 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 SYS1Q8N2H4 156 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 INTS14Q96SY0 518 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 PIGQQ9BRB3 760 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 SRXN1Q9BYN0 137 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 CEP295Q9C0D2 2601 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 NXF2Q9GZY0 626 aaKnown RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 QPCTLQ9NXS2 382 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 MRM2Q9UI43 246 aaKnown RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 SLC35F4A4IF30 521 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 NPIPB13A6NJU9 1138 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 NPIPB4C9JG80 1138 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 PMS2P2O95744 297 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 WNT11O96014 354 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 HLA-DQA2P01906 255 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 OR8G3PP0DMU2 310 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 GDF1P27539 372 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 FGF9P31371 208 aaPredicted RBP16.44■□□□□ 0.22
USP39-201ENST00000323701 CAV3P56539 151 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 CLDN15P56746 228 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 RAC1P63000 192 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 CAMK2DQ13557 499 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 IGF2-ASQ6U949 168 aa16.44■□□□□ 0.22
USP39-201ENST00000323701 UEVLDQ8IX04 471 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms