RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 LINC00303Q3SY05 128 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 FAHD2BQ6P2I3 314 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 DHRS11Q6UWP2 260 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 APOOLQ6UXV4 268 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 UBE2R2Q712K3 238 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 OR4K1Q8NGD4 311 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 OR2AP1Q8NGE2 309 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SPPL2AQ8TCT8 520 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 NUDCD2Q8WVJ2 157 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SORCS1Q8WY21 1168 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CORO2AQ92828 525 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 FAHD2AQ96GK7 314 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 WFIKKN1Q96NZ8 548 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PANX1Q96RD7 426 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CDC6Q99741 560 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ARHGDIGQ99819 225 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 REPIN1Q9BWE0 567 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTR3CQ9C0K3 210 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PCBD2Q9H0N5 130 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 DMRT3Q9NQL9 472 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SEMA5BQ9P283 1151 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF346Q9UL40 294 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TNFSF18Q9UNG2 199 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TMED3Q9Y3Q3 217 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ATG4BQ9Y4P1 393 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TIMM13Q9Y5L4 95 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 FLVCR1Q9Y5Y0 555 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM269A0A1B0GVZ9 245 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HEPACAM2A8MVW5 462 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 F5H0A9 414 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 M0R036 132 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SERPIND1P05546 499 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 GALTP07902 379 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 NME2P22392 152 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SULT1A1P50225 295 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CCR5P51681 352 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CCR8P51685 355 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 DGKEP52429 567 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ERVFC1-1P60608 527 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTBP60709 375 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTA2P62736 377 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 POLR2LP62875 67 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTG1P63261 375 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTG2P63267 376 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTC1P68032 377 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ACTA1P68133 377 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SCARB2Q14108 478 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 MST1LQ2TV78 715 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 BEX5Q5H9J7 111 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 GGNBP1Q5YKI7 109 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 REEP3Q6NUK4 255 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SYT12Q8IV01 421 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TCEANCQ8N8B7 351 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 AQP11Q8NBQ7 271 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ARSGQ96EG1 525 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 AKR1E2Q96JD6 320 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 FAAP24Q9BTP7 215 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SELENOIQ9C0D9 397 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CSTL1Q9H114 145 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 NMNAT1Q9HAN9 279 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 LMAN1LQ9HAT1 526 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 EP400Q96L91 3159 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 A0A1W2PPE2 198 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CPED1A4D0V7 1026 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 NKX6-3A6NJ46 265 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PRODHO43272 600 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CD74P04233 296 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CD5P06127 495 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PRSS56P0CW18 603 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 VSIG10L2P0DP72 767 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 GABRR1P24046 479 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TACR1P25103 407 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 ELAVL4P26378 380 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CORO1AP31146 461 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 IFNGR2P38484 337 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 TM4SF4P48230 202 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SLC37A1P57057 533 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 UBE2MP61081 183 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SNRPD1P62314 119 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SRSF5Q13243 272 aaKnown RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 XKR6Q5GH73 641 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 RNF219Q5W0B1 726 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-201ENST00000316433 GLT8D1Q68CQ7 371 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 OR8G2PQ6IF36 304 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 SFXN4Q6P4A7 337 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 KCTD9Q7L273 389 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 PRSS45Q7RTY3 260 aa6.07□□□□□ -1.44
ZNF540-201ENST00000316433 CD163Q86VB7 1156 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms