RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 HLA-AP01891 365 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 POU3F3P20264 500 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 HTR5AP47898 357 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 RPL18Q07020 188 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TNK1Q13470 666 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 LIX1LQ8IVB5 337 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 OR6F1Q8NGZ6 308 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 TMEM59Q9BXS4 323 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 RBM38Q9H0Z9 239 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 PCED1AQ9H1Q7 454 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 CALCBP10092 127 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 EVI2BP34910 448 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 CCR9P51686 369 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ZIC1Q15915 447 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 ACKR1Q16570 336 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 GLYR1Q49A26 553 aaPredicted RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 IDO2Q6ZQW0 420 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 CMTM1Q8IZ96 169 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 UTP23Q9BRU9 249 aaKnown RBP15.3■□□□□ 0.04
PHRF1-201ENST00000264555 KLHL13Q9P2N7 655 aa15.3■□□□□ 0.04
PHRF1-201ENST00000264555 AKR7A3O95154 331 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 APOC3P02656 99 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 TAS2R46P59540 309 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 MFAP5Q13361 173 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 GLYATL3Q5SZD4 288 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 KIRREL2Q6UWL6 708 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 PGAP1Q75T13 922 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 G3V3Y1 287 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 TRAPPC2P0DI81 140 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 TRAPPC2BP0DI82 140 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 ENPP1P22413 925 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 PRKACBP22694 351 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SF3B4Q15427 424 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■■■■□ 22.9
PHRF1-201ENST00000264555 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SFTPA1Q8IWL2 248 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 KDM8Q8N371 416 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SEMA4CQ9C0C4 833 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 CHST11Q9NPF2 352 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SLAMF7Q9NQ25 335 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 MRPS28Q9Y2Q9 187 aaKnown RBP15.29■□□□□ 0.04
PHRF1-201ENST00000264555 NKX2-2O95096 273 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 CD46P15529 392 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 CARD18P57730 90 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 BTG1P62324 171 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 RPL19P84098 196 aaKnown RBP15.29■□□□□ 0.04
PHRF1-201ENST00000264555 CDK5Q00535 292 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 C11orf91Q3C1V1 193 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF611Q8N823 705 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 CD300LFQ8TDQ1 290 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 GPBAR1Q8TDU6 330 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 ST8SIA1Q92185 356 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF775Q96BV0 537 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-201ENST00000264555 FGGYQ96C11 551 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 B4DXG7 233 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 EFNA3P52797 238 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SULF2Q8IWU5 870 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 OR5L1Q8NGL2 311 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 SMIM19Q96E16 107 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 RAB3CQ96E17 227 aa15.29■□□□□ 0.04
PHRF1-201ENST00000264555 GPR55Q9Y2T6 319 aaPredicted RBP15.29■□□□□ 0.04
PHRF1-201ENST00000264555 COL9A1P20849 921 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 GPR3P46089 330 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 HAGHLQ6PII5 290 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 MOB3CQ70IA8 216 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 RRNAD1Q96FB5 475 aaKnown RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 SPIN2AQ99865 258 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 SPIN2BQ9BPZ2 258 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 B3GALT1Q9Y5Z6 326 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 LIPCP11150 499 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 FCGR2AP12318 317 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 NME1P15531 152 aaKnown RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ETV6P41212 452 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 HSF1Q00613 529 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ADGRE4PQ86SQ3 457 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 OR4K15Q8NH41 348 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 FNDC9Q8TBE3 224 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 SP7Q8TDD2 431 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 GALNT9Q9HCQ5 603 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 DDOSTP39656 456 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF628Q5EBL2 1059 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 RPS19BP1Q86WX3 136 aaKnown RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 PIGCQ92535 297 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 TMEM43Q9BTV4 400 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 SIRT3Q9NTG7 399 aaPredicted RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 TTLL8A6PVC2 850 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 SOX18P35713 384 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 PLPP7Q8NBV4 271 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ZFAND1Q8TCF1 268 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ZC3H10Q96K80 434 aaKnown RBP15.28■□□□□ 0.04
PHRF1-201ENST00000264555 FCRL1Q96LA6 429 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 DOK1Q99704 481 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 RAB22AQ9UL26 194 aa15.28■□□□□ 0.04
PHRF1-201ENST00000264555 ATG12O94817 140 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 DDAH2O95865 285 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 MTCP1P56278 107 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CDC20Q12834 499 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CLVS2Q5SYC1 327 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 STEAP1BQ6NZ63 245 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms