RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PLPPR5Q32ZL2 321 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 SLC6A19Q695T7 634 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 TIGD4Q8IY51 512 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 FAM83FQ8NEG4 500 aaPredicted RBP20.29■□□□□ 0.84
CDX1-201ENST00000231656 FDCSPQ8NFU4 85 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 ABHD4Q8TB40 342 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 AP3S1Q92572 193 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 MRPL48Q96GC5 212 aaKnown RBP20.29■□□□□ 0.84
CDX1-201ENST00000231656 SNX18Q96RF0 628 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 SDHCQ99643 169 aaPredicted RBP20.29■□□□□ 0.84
CDX1-201ENST00000231656 TXNIPQ9H3M7 391 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 PTGES2Q9H7Z7 377 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 TBCCD1Q9NVR7 557 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 V9GYH0 126 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 ARHGEF9O43307 516 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 ADRB1P08588 477 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 IL11P20809 199 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 MTNR1BP49286 362 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 CDK5R1Q15078 307 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 ZNF684Q5T5D7 378 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 TIGD3Q6B0B8 471 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 SPACA3Q8IXA5 215 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 OR1J4Q8NGS1 313 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 MFSD8Q8NHS3 518 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 MRGPRX4Q96LA9 322 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 JSRP1Q96MG2 331 aaPredicted RBP20.29■□□□□ 0.84
CDX1-201ENST00000231656 GNRHR2Q96P88 292 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 RNF32Q9H0A6 362 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 SYT4Q9H2B2 425 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 PPIL3Q9H2H8 161 aaKnown RBP20.29■□□□□ 0.84
CDX1-201ENST00000231656 DEPPQ9NTK1 212 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 GNG8Q9UK08 70 aa20.29■□□□□ 0.84
CDX1-201ENST00000231656 ISPDA4D126 451 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 PRR32B1ATL7 298 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 PLGP00747 810 aaPredicted RBP20.28■□□□□ 0.84
CDX1-201ENST00000231656 CNR1P21554 472 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 AHCYP23526 432 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 GTF2E2P29084 291 aaKnown RBP20.28■□□□□ 0.84
CDX1-201ENST00000231656 EIF2S3P41091 472 aaKnown RBP20.28■□□□□ 0.84
CDX1-201ENST00000231656 TRIM16LQ309B1 348 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 STEAP3Q658P3 488 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 PM20D2Q8IYS1 436 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 MINDY2Q8NBR6 621 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 POC1BQ8TC44 478 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 GHSRQ92847 366 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 RELTQ969Z4 430 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 ARL5BQ96KC2 179 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 ABCB9Q9NP78 766 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 ACOXLQ9NUZ1 547 aa20.28■□□□□ 0.84
CDX1-201ENST00000231656 FREM3P0C091 2139 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 OR5H15A6NDH6 313 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 SHISA8B8ZZ34 492 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 EFNA2O43921 213 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 NCR1O76036 304 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 OR6A2O95222 327 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 CD1AP06126 327 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 GPR85P60893 370 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 SIRPAP78324 504 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 PLEKHG7Q6ZR37 379 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 PXKQ7Z7A4 578 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 ABTB1Q969K4 478 aaPredicted RBP20.27■□□□□ 0.84
CDX1-201ENST00000231656 SMIM19Q96E16 107 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 TRAPPC4Q9Y296 219 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 KLHDC2Q9Y2U9 406 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 MGAQ8IWI9 3026 aa20.27■□□□□ 0.84
CDX1-201ENST00000231656 PRSS37A4D1T9 235 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 XKRYO14609 159 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 GDI2P50395 445 aaKnown RBP20.26■□□□□ 0.83
CDX1-201ENST00000231656 MAP2K6P52564 334 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 ZP4Q12836 540 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 MFSD13AQ14CX5 517 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 CCDC58Q4VC31 144 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 RPL22L1Q6P5R6 122 aaKnown RBP20.26■□□□□ 0.83
CDX1-201ENST00000231656 CDC20BQ86Y33 519 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 MS4A15Q8N5U1 240 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 SCAIQ8N9R8 606 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 RPS4Y2Q8TD47 263 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 HAS2Q92819 552 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 DDIT4LQ96D03 193 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 ATF6BQ99941 703 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 MARCH7Q9H992 704 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 VSX1Q9NZR4 365 aaPredicted RBP20.26■□□□□ 0.83
CDX1-201ENST00000231656 CACNA1AO00555 2505 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 NCOR2Q9Y618 2525 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 IMPDH2P12268 514 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 PSMD7P51665 324 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 CEACAM19Q7Z692 300 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 MDS2Q8NDY4 140 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 RNF166Q96A37 237 aaPredicted RBP20.26■□□□□ 0.83
CDX1-201ENST00000231656 CCDC32Q9BV29 185 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 HES7Q9BYE0 225 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 POTEKPQ9BYX7 375 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 FKBP7Q9Y680 259 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 IGF2RP11717 2491 aa20.26■□□□□ 0.83
CDX1-201ENST00000231656 ALPK2Q86TB3 2170 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 TVP23AA6NH52 213 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 MS4A18H0YCH9 400 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 FZD7O75084 574 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 CBR3O75828 277 aa20.25■□□□□ 0.83
CDX1-201ENST00000231656 CEACAM4O75871 244 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms