RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TTTY10Q9BZA0 68 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 ZNF703Q9H7S9 590 aaPredicted RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 TXNL4BQ9NX01 149 aaKnown RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 RASD1Q9Y272 281 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 KLF13Q9Y2Y9 288 aaPredicted RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 NCKAP5O14513 1909 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 TVP23AA6NH52 213 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 ZNF814B7Z6K7 855 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 DNPH1O43598 174 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 HLA-DPB1P04440 258 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 ZNF43P17038 809 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CD53P19397 219 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 GLO1Q04760 184 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CRTC2Q53ET0 693 aaPredicted RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 VASNQ6EMK4 673 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 MDS2Q8NDY4 140 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 OR6N2Q8NGY6 317 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 TM9SF2Q99805 663 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 NAA11Q9BSU3 229 aaPredicted RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 SLIRPQ9GZT3 109 aaKnown RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 WDR76Q9H967 626 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CCDC59Q9P031 241 aaKnown RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 POLHQ9Y253 713 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 TMEM14AQ9Y6G1 99 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 FREM3P0C091 2139 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 ALPK2Q86TB3 2170 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 TRDV1A0A1B0GX56 115 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 LINC01387J3KSC0 135 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 PLPP2O43688 288 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 TRAF3IP2O43734 574 aaPredicted RBP16.21■□□□□ 0.19
VIM-201ENST00000224237 NME2P1O60361 137 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 VAMP5O95183 116 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 HLA-DQA2P01906 255 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 SP1P08047 785 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 NME2P22392 152 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 GALP22466 123 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 FGF9P31371 208 aaPredicted RBP16.21■□□□□ 0.19
VIM-201ENST00000224237 BMXP51813 675 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 GBX2P52951 348 aaPredicted RBP16.21■□□□□ 0.19
VIM-201ENST00000224237 TBC1D25Q3MII6 688 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 TP53I3Q53FA7 332 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 WIPI1Q5MNZ9 446 aaPredicted RBP16.21■□□□□ 0.19
VIM-201ENST00000224237 SLC25A25Q6KCM7 469 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 EGFL6Q8IUX8 553 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 SYT14Q8NB59 555 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 TMED9Q9BVK6 235 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 TSPAN10Q9H1Z9 355 aaPredicted RBP16.21■□□□□ 0.19
VIM-201ENST00000224237 PALMDQ9NP74 551 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 LAMP5Q9UJQ1 280 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 GSTK1Q9Y2Q3 226 aa16.21■□□□□ 0.19
VIM-201ENST00000224237 A0A0J9YW62 118 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 CENPBD1B2RD01 187 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 TNFSF11O14788 317 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 PHYHO14832 338 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 CD46P15529 392 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 FABP5Q01469 135 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 FOXC1Q12948 553 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 PELI1Q96FA3 418 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 EMC6Q9BV81 110 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 ZNF552Q9H707 407 aaPredicted RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 SIAEQ9HAT2 523 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 GNG8Q9UK08 70 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 ZNF891A8MT65 544 aaPredicted RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 E9PI62 339 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 LRRTM2O43300 516 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 IGHG1P01857 330 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 HPNP05981 417 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 SOX6P35712 828 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 GFRA1P56159 465 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 RAC3P60763 192 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 ARG2P78540 354 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 POU4F3Q15319 338 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 TRAM1Q15629 374 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 ETFDHQ16134 617 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 C22orf42Q6IC83 251 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 PLEKHG7Q6ZR37 379 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 ESPNLQ6ZVH7 1005 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 DPY19L4Q7Z388 723 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 KCTD20Q7Z5Y7 419 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 OR6X1Q8NH79 312 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 HAS2Q92819 552 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 SLC25A44Q96H78 314 aaPredicted RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 ADAD1Q96M93 576 aaKnown RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 KCTD7Q96MP8 289 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 DACH2Q96NX9 599 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 MRPL13Q9BYD1 178 aaKnown RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 TTTY12Q9BZ98 90 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 KLHL13Q9P2N7 655 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 SIRT4Q9Y6E7 314 aaPredicted RBP16.2■□□□□ 0.18
VIM-201ENST00000224237 PMF1-BGLAPU3KQ54 211 aa16.2■□□□□ 0.18
VIM-201ENST00000224237 KLRC4-KLRK1H3BQV0 150 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 RAMP1O60894 148 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 GPANK1O95872 356 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 FMODQ06828 376 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 EGR3Q06889 387 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 CDC20Q12834 499 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 CCDC58Q4VC31 144 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 DMKNQ6E0U4 476 aaPredicted RBP16.19■□□□□ 0.18
VIM-201ENST00000224237 ARL9Q6T311 187 aa16.19■□□□□ 0.18
VIM-201ENST00000224237 ASB18Q6ZVZ8 466 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms