RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Tmem200cJ3QK46 637 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Vmn1r94K7N6X3 305 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rpl7P14148 270 aaKnown RBP12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 KitlgP20826 273 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Tamm41Q3TUH1 337 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 LcorQ6ZPI3 433 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Iglon5Q8HW98 336 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Vmn1r75Q8R289 305 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr514Q8VFZ6 310 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 4930553M12RikQ9CUH1 165 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Phf19Q9CXG9 578 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Tsc22d4Q9EQN3 387 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Dok3Q9QZK7 444 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Eif2s3xQ9Z0N1 472 aaKnown RBP12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Eif2s3yQ9Z0N2 472 aa12.81□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Gm12789B1AUV7 164 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cyp2d37-psF6YKB5 150 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Dbil5O09035 87 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Ercc1P07903 298 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Nkx3-2P97503 333 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 MeikinQ5F2C3 434 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Sult2a8Q8BGL3 282 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Eif5a2Q8BGY2 153 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Prss50Q8BLH5 439 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 PigmQ8C2R7 423 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Q8R3C1 574 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr870Q8VGG4 311 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rps21Q9CQR2 83 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Zfp40B1B1D3 796 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 EomesO54839 707 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Chrnb1P09690 501 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cd82P40237 266 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Fabp7P51880 132 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rab3aP63011 220 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr140Q60878 302 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Timd4Q6U7R4 343 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr1148Q7TR35 314 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cbx7Q8VDS3 158 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Hemk1Q921L7 340 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Ttc6G3UYY4 1857 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Lamb2Q61292 1799 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr59B1ARL3 323 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr543E9PWI5 336 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Grcc10O35127 126 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Ppt1O88531 306 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 InipQ3TXT3 104 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr146Q60884 306 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 ZpbpQ62522 350 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr1219Q7TR04 311 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Bcas1Q80YN3 633 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Gm13199Q8C8E0 125 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 BanpQ8VBU8 548 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Emc9Q9DB76 206 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Bbs10Q9DBI2 713 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 PrkraQ9WTX2 313 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Tex264E9Q137 309 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Zfp955bL7N232 545 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Prdx4O08807 274 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Zfand5O88878 213 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cd8aP01731 247 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr13P34984 310 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Casp3P70677 277 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Entpd6Q3U0P5 455 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Wdr20Q3UWE6 569 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Gm2aQ60648 193 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 4933402N03RikQ8CDT9 329 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Esco2Q8CIB9 592 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Alkbh3Q8K1E6 286 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cbr3Q8K354 277 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr133Q8VG94 312 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rpp25Q91WE3 199 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rps19Q9CZX8 145 aaKnown RBP12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Ccnl2Q9JJA7 518 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Psmb3Q9R1P1 205 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Fhl5Q9WTX7 284 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Cep290Q6A078 2472 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Atad5Q4QY64 1826 aa12.8□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Zfp964B2RR88 472 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Prss39O70169 367 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Hoxc4Q08624 264 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Defb28Q3V2L0 89 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Slc27a5Q4LDG0 689 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Pld6Q5SWZ9 221 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Mef2aQ60929 498 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Slc35a1Q61420 336 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 H2-M2Q6W9L1 343 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Olfr1385Q7TQT1 309 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Fam124bQ8BLQ0 456 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 FarsaQ8C0C7 508 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Tspan10Q8VCF5 331 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Zcchc14Q8VIG0 956 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Slc19a3Q99PL8 488 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Slco6d1Q9D5W6 683 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Pkmyt1Q9ESG9 490 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Mia3Q8BI84 1930 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Rps25P62852 125 aaKnown RBP12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Tie1Q06806 1134 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 CalcrQ60755 533 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Pex12Q8VC48 359 aa12.79□□□□□ -0.36
Pcdha1-202ENSMUST00000193839 Nsa2Q9CR47 260 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms