RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Hyal3Q8VEI3 412 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1226Q8VGM5 310 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr558Q8VGZ7 317 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Egln3Q91UZ4 239 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Asb10Q91ZT7 467 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cdca3Q99M54 266 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Med11Q9D8C6 117 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc48a1Q9D8M3 146 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Smim23Q9DAL0 136 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Sdf2Q9DCT5 211 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmem176bQ9R1Q6 263 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc37a2Q9WU81 501 aa13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Klf5Q9Z0Z7 446 aaKnown RBP13.42□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tuba1bP05213 451 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Hoxa10P31310 416 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mfap2P55002 183 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Sf3b6P59708 125 aaKnown RBP13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tuba1aP68369 451 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc2a6Q3UDF0 497 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Spata13Q5DU57 656 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Prm3Q62100 101 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Pan3Q640Q5 837 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 S100a15aQ6S5I3 108 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1166Q7TR27 316 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm10283Q8C3L5 117 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rprd1bQ9CSU0 326 aaKnown RBP13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tysnd1Q9DBA6 568 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 PpieQ9QZH3 301 aaKnown RBP13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 SrrQ9QZX7 339 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cacna1gQ5SUF7 2381 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Dock10Q8BZN6 2150 aa13.41□□□□□ -0.26
Nup88-202ENSMUST00000108530 Btbd35f21A0A140T8Q5 498 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 A0A1W2P799 418 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fam90a1aA2A4E2 429 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zyg11aA2BFL2 627 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Sac3d1A6H687 427 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Btbd35f22J3QN64 498 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cd83O88324 196 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fgf11P70378 225 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mrgprb2Q3KNA1 338 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Nr1d2Q60674 576 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Cpeb3Q7TN99 716 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 DgkzQ80UP3 929 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Katnb1Q8BG40 658 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 P4htmQ8BG58 503 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Baiap2Q8BKX1 535 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zbtb26Q8C8S0 451 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 4933402N03RikQ8CDT9 329 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr63Q8VBW9 316 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gbgt1Q8VI38 347 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Chchd6Q91VN4 273 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slco1a6Q99J94 670 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Mrpl54Q9CPW3 135 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Txndc17Q9CQM5 123 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Fbxo8Q9QZN3 319 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Arid1aA2BH40 2283 aaKnown RBP13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zfp407G3UVV3 2246 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm16432A0A0A6YXX9 775 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Prps1l3G3UXL2 318 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 MfngO09008 321 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Arl6O88848 186 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 CyctP00015 105 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 EbpP70245 230 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 S100gP97816 79 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Samd12Q0VE29 161 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Grxcr2Q3TYR5 254 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Alg11Q3TZM9 492 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Ankrd53Q3V0J4 497 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tmub2Q3V209 319 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc26a10Q5EBI0 492 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Orm1Q60590 207 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tssk1bQ61241 365 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Orai1Q8BWG9 304 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc25a1Q8JZU2 311 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr51Q8VGG9 307 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr1052Q8VGR8 312 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Olfr283Q8VGU2 309 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Snapc3Q9D2C9 407 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Zdhhc4Q9D6H5 343 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Prps1Q9D7G0 318 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Pde7bQ9QXQ1 446 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Slc7a7Q9Z1K8 510 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Tnrc6aQ3UHK8 1896 aaKnown RBP13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Gm884A2A9H6 3643 aa13.4□□□□□ -0.26
Nup88-202ENSMUST00000108530 Rasgef1aA0A0N4SVR5 498 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr544E9PX47 334 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 LipiF6YQT7 476 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cdk1P11440 297 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Cd79aP11911 220 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Smad5P97454 465 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Apoc2Q05020 97 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 RalyQ64012 312 aaKnown RBP13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr1222Q7TR02 311 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr843Q7TRG4 313 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Olfr714Q7TRN0 317 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Dcaf12Q8BGZ3 453 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Flrt2Q8BLU0 660 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Clec9aQ8BRU4 238 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Pamr1Q8BU25 720 aa13.39□□□□□ -0.27
Nup88-202ENSMUST00000108530 Coq9Q8K1Z0 313 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms