RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KIR2DL3P43628 341 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 MAP2K3P46734 347 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 PITPNBP48739 271 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 INSM1Q01101 510 aaPredicted RBP17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 MFSD13AQ14CX5 517 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 BICRALQ6AI39 1079 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF544Q6NX49 715 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ARSKQ6UWY0 536 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 PRR23CQ6ZRP0 262 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ZBTB44Q8NCP5 570 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 PMEPA1Q969W9 287 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 ZC3HAV1LQ96H79 300 aaKnown RBP17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 KLRF1Q9NZS2 232 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 FRRS1LQ9P0K9 344 aa17.77■□□□□ 0.43
PCDHB11-202ENST00000624887 WDR87Q6ZQQ6 2873 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 HSPB2A8KAH6 182 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF208O43345 1280 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 FZD7O75084 574 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 OR2J2O76002 312 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 SP9P0CG40 484 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF24P17028 368 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF28P17035 718 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 MSX1P28360 303 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 CENPAP49450 140 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 BLVRAP53004 296 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 ZFP36L1Q07352 338 aaKnown RBP17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 HSPB2Q16082 182 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 FAM69BQ5VUD6 431 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 SLC23A3Q6PIS1 610 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 AGBL5Q8NDL9 886 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 MFSD8Q8NHS3 518 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 OTOSQ8NHW6 89 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 ENKURQ8TC29 256 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 SLC22A8Q8TCC7 542 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 NXPE2Q96DL1 559 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 DERL3Q96Q80 235 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 RBFOX1Q9NWB1 397 aaKnown RBP17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 IKZF2Q9UKS7 526 aa17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 AK6Q9Y3D8 172 aaKnown RBP17.76■□□□□ 0.43
PCDHB11-202ENST00000624887 IGLV3-32A0A0A0MS00 114 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 IGLV1-36A0A0B4J1U3 117 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 ACOD1A6NK06 481 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 FBXO45P0C2W1 286 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 PRKAR1AP10644 381 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 CCKBRP32239 447 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 PTGDSP41222 190 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 RPS27P42677 84 aaKnown RBP17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 PUDPQ08623 228 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 ZP4Q12836 540 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 MZT2BQ6NZ67 158 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF248Q8NDW4 579 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 OR5H6Q8NGV6 325 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 OR5AK2Q8NH90 309 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 THEM6Q8WUY1 208 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 ARL5BQ96KC2 179 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 SMAD5Q99717 465 aaKnown RBP17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 PPP4R1LQ9P1A2 415 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 VDAC3Q9Y277 283 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 LOC102723996A0A087X1L8 192 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 SLC22A23A1A5C7 686 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 MEIOCA2RUB1 952 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 TFECO14948 347 aaPredicted RBP17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 SLC16A7O60669 478 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 PSKH1P11801 424 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 IL11P20809 199 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 MAP2K6P52564 334 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 FOXF1Q12946 379 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 UBE2J2Q8N2K1 259 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 OR10G3Q8NGC4 313 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 RELTQ969Z4 430 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 DDIT4LQ96D03 193 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 WACQ9BTA9 647 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 DEFB126Q9BYW3 111 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 SDHAF3Q9NRP4 125 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 TEKT2Q9UIF3 430 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 KCNG2Q9UJ96 466 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 HRH3Q9Y5N1 445 aa17.75■□□□□ 0.43
PCDHB11-202ENST00000624887 MS4A18H0YCH9 400 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 ZNF593O00488 134 aaPredicted RBP17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 PDCD5O14737 125 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 LYRM1O43325 122 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 HLA-DQA2P01906 255 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 SNRPBP14678 240 aaKnown RBP17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 INPP1P49441 399 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 NTRK2Q16620 822 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 MS4A18Q3C1V0 323 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 PYHIN1Q6K0P9 492 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 DUSP18Q8NEJ0 188 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 ELP5Q8TE02 316 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 TSPAN10Q9H1Z9 355 aaPredicted RBP17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 RNF121Q9H920 327 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 MOV10Q9HCE1 1003 aaKnown RBP17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 BRD7Q9NPI1 651 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 GPN3Q9UHW5 284 aaPredicted RBP17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 SPATA2Q9UM82 520 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 WIF1Q9Y5W5 379 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 B3GALT1Q9Y5Z6 326 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 ZDBF2Q9HCK1 2354 aa17.74■□□□□ 0.43
PCDHB11-202ENST00000624887 A0A087WV48 116 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms