RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CDK5R2Q13319 367 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CRMP1Q14194 572 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 HIST3H3Q16695 136 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 MESTQ5EB52 335 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 RIPPLY2Q5TAB7 128 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 AADACL4Q5VUY2 407 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 LEG1Q6P5S2 330 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 FAM214BQ7L5A3 538 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CXXC5Q7LFL8 322 aaKnown RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ABHD12BQ7Z5M8 362 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 NOXO1Q8NFA2 376 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 HDAC2Q92769 488 aaKnown RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 RASD2Q96D21 266 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 TXNDC15Q96J42 360 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 CNBD2Q96M20 576 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF385AQ96PM9 386 aaKnown RBP10.35□□□□□ -0.75
TARDBP-217ENST00000616545 OR2M2Q96R28 347 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 NMNAT3Q96T66 252 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 NMNAT2Q9BZQ4 307 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 PLCXD1Q9NUJ7 323 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ASB6Q9NWX5 421 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF226Q9NYT6 803 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 BLOC1S6Q9UL45 172 aa10.35□□□□□ -0.75
TARDBP-217ENST00000616545 E9PLN8 166 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 CLIC3O95833 236 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 IL18BPO95998 194 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 CCDC159P0C7I6 412 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 AGTR1P30556 359 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 CSNK1A1P48729 337 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 ZNF133P52736 654 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 PER3P56645 1201 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 MELKQ14680 651 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 GUSBP1Q15486 140 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RBM48Q5RL73 367 aaKnown RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 LCN1P1Q5VSP4 162 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RTL6Q6ICC9 239 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 NIPAL3Q6P499 406 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RPTNQ6XPR3 784 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 ZBTB46Q86UZ6 589 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 CPOQ8IVL8 374 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 TUSC5Q8IXB3 177 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 C20orf196Q8IYI0 205 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM123Q8N131 208 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 SDR9C7Q8NEX9 313 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 OR6K3Q8NGY3 331 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 OR6N1Q8NGY5 312 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 PTP4A1Q93096 173 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 TMEM54Q969K7 222 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 APH1AQ96BI3 265 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 NR1H4Q96RI1 486 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 IL4I1Q96RQ9 567 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 TTYH2Q9BSA4 534 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 SFXN3Q9BWM7 321 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RACGAP1Q9H0H5 632 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 HINT3Q9NQE9 182 aaKnown RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RASSF1Q9NS23 344 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 SCN3BQ9NY72 215 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 HAO2Q9NYQ3 351 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 GLTPQ9NZD2 209 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 WARS2Q9UGM6 360 aaKnown RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 RPL36Q9Y3U8 105 aaKnown RBP10.34□□□□□ -0.75
TARDBP-217ENST00000616545 FAM215AQ9Y5M1 114 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 KIAA1549Q9HCM3 1950 aa10.34□□□□□ -0.75
TARDBP-217ENST00000616545 OR6C68A6NDL8 312 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 HSPB2A8KAH6 182 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 B8ZZF3 427 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 KHDRBS3O75525 346 aaKnown RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 SLC2A10O95528 541 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 STSP08842 583 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 HTR1FP30939 366 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 GUCA1AP43080 201 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 CA7P43166 264 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 GLO1Q04760 184 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 POU4F2Q12837 409 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 CAMK2DQ13557 499 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 HSPB2Q16082 182 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 NRN1LQ496H8 165 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 C6orf141Q5SZD1 244 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 MTFR2Q6P444 385 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 PLBD1Q6P4A8 553 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 ZNF100Q8IYN0 542 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 GPR137CQ8N3F9 429 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 C9orf106Q8NAJ2 232 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 NMD3Q96D46 503 aaKnown RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 ZNF582Q96NG8 517 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 MYCBPQ99417 103 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 EMC6Q9BV81 110 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 SYT4Q9H2B2 425 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 SLCO5A1Q9H2Y9 848 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 FOXD3Q9UJU5 478 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-217ENST00000616545 GPR52Q9Y2T5 361 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 TPRKBQ9Y3C4 175 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 PCDHGB1Q9Y5G3 927 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 CFAP47Q6ZTR5 3102 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 USP24Q9UPU5 2620 aa10.33□□□□□ -0.76
TARDBP-217ENST00000616545 GTF3C1Q12789 2109 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms